2020 Abstracts

Terreros, Eduardo N.; Dr. Roberts, Andrew G. (University of Utah)
Faculty Advisor: Roberts, Andrew G. (University of Utah, Chemistry)

Chromatography is an indispensable tool in most chemistry laboratories, as it provides a way to separate multiple components within a chemical mixture. The separation can be evaluated by the use of various chromatographic methodologies that have been developed to target specific chemical properties (e.g. size, mass, molecular interactions) of the desired compounds. Chromatographic methods are utilized to gather qualitative information in order to observe more general trends, or quantitative data to further explore observations in greater detail.

Thin Layer Chromatography (TLC) is a well-established method for collecting qualitative data from chemical reactions. Although Quantitative TLC (QTLC) methods have been developed, they are limited due to their high complexity, and cost prohibitive nature. The advancement of a Semi-Quantitative Thin Layer Chromatography (S-QTLC) method will provide a quick, low cost method to track organic reactions. We developed a low-cost alternative that uses readily available materials to gather images of TLC plates and process them into semi-quantitative data. In order to achieve this, we have constructed a small image gathering box made of opaque acrylic fitted with two 254 nm UV lamps and a Raspberry Pi Zero W with a camera module to acquire the images. The images are imported to a PC and processed by a custom built MatLab function. We demonstrated that this system can be utilized to gather qualitative data. Current studies will validate semi-quantitative data collection and reaction tracking and work is currently being done to validate semi-quantitative data collection.

Fazio, Nicholas; Russell, Michael; Krapohl, John; Andrus, Brayden; Hansen, Marc (Brigham Young University)
Faculty Advisor: Hansen, Marc (Brigham Young University, Physiology and Developmental Biology)

PIM 3 is a proto-oncogene with serine/threonine kinase activity that can prevent apoptosis, promote cell survival and protein translation. Abnormal PIM3 activity contributes to tumorigenesis by phosphorylation of targets that release anti-apoptotic proteins. Pathological PIM3 expression is common in pancreatic and prostate cancer. Inhibiting this kinase activity can be used to therapeutically suppress uncontrolled cell growth in cancerous tissues. Synthetic inhibitors are being developed as therapeutics to treat PIM3 related disorders. Compounds derived from plants and natural sources have therapeutically-relevant biological activity. Additionally, they often well tolerated, making them important starting points for drug discovery efforts. A less widely used approach to discover the biological activity of molecules is built around using a large scale in-silico molecular screening, which has emerged as a critical drug discovery tool. Here, we screen a large (>100,000 compound) virtual library of natural product compounds for binding in the PIM3 ATP binding site, then validate compounds with using cell-based and immuno-based assays. This approach reveals PIM3 inhibition by a saponin scaffold, which suggests potential utility as a therapeutic or as a lead for further optimization.

Leininger, Sara; Minteer, Shelley; Rhodes, Zayn; Sigman, Matt; Pancoast, Adam (University of Utah)
Faculty Advisor: Minteer, Shelley (University of Utah College of Science, Chemisty)

In the effort to improve renewable energy as a response to the depletion of fossil fuels, one important aspect to consider is the availability of such sources. The supply of solar and wind power, for example, faces issues with intermittency. Therefore, it is crucial to develop reliable energy storage methods, with redox flow batteries (RFBs) being of particular interest given their potential low cost and high efficiency. RFBs operate similarly to conventional batteries, except the anode and cathode materials are dissolved in electrolyte solutions, and pumped into the electrochemical cell from external storage tanks. Within the cell, the anode and cathode species are separated by a membrane to prevent them from mixing, which would cause the battery to self-discharge. RFBs can utilize aqueous- or organic-based electrolyte solutions, with organic solvents being especially appealing, as the electrochemical potential window is larger than water. However, one major impediment of using organic solvent is the high chemical crossover rate of anode and cathode species through the membrane, causing rapid capacity fade of the battery. Several research studies have shown that the use of redox active polymers (RAPs) with high molecular weights, paired with a size-exclusion membrane effectively counteracts this problem. The resulting steric hindrance between the small pores of the membrane and these large molecules blocks any crossover from the active species. This study will include the construction of an RFB using two previously developed RAPs demonstrated to have high electrochemical cycling stability as electrolytes. By using RAPs as both anode and cathode materials, it is expected that chemical crossover will be minimized, and the lifetime of the battery will be elongated compared to an RFB with one or both species in monomeric form. This study will be significant in the advancement of RFBs, potentially leading to their widespread use for energy storage.

Phan, Anh; Jensen, Joseph (Utah Valley University)
Faculty Advisor: Jensen, Joseph (Utah Valley University, Physics)

We have measured the Surface Brightness Fluctuation (SBF) distances to 12 galaxies. SBF is usually used to measure distances to giant elliptical galaxies that have uniform ages and composition. On the other hand, galaxies that are more disk-shaped potentially have a range of ages, they may have an SBF and color gradient. Elliptical masks that match the shapes of disk galaxies can give a more accurate SBF and color gradient than circular masks. The purpose of this study is to measure the discrepancies between the SBF distances using the two types of masks. For giant elliptical galaxies, the two methods give similar results ($\leq$ 2\%). For disk galaxies, the discrepancies are bigger (up to 6\% difference).

Holdaway, Bailey; Emily, Martin; Kettenring, Karin (Utah State University)
Faculty Advisor: Kettenring, Karin (S.J. & Jessie E. Quinney College of Natural Resources, Watershed Sciences Department);

Seeds are the primary revegetation method for Great Salt Lake wetlands, however, the density and the priority timing to sow seeds are not clear to wetland managers due to a lack of Great Salt Lake specific revegetation research. Having too low a native seed sowing density could allow unwanted species like the non-native invasive plant Phragmites to reinvade. Too high of a density and density-dependent mortality of sown native seeds could occur, resulting in wasted seeds and unneeded costs for resource-limited managers. In addition, the priority timing (i.e., the relative time and order that seeds are sown) of sowing is also vital for revegetation to favor natives over unwanted invasives. Therefore, our research goal was to determine the optimal seed sowing density and timing priority for reestablishing Great Salt Lake native wetland plant communities. We conducted an outdoor mesocosm experiment with two native sowing densities (3 and 5x the standard sowing density in the region) and three native seed mix sowing timings (4, 2, or 0 weeks prior to sowing Phragmites seeds). We determined the cover of the native plant community and Phragmites at the end of the growing season across the 6 treatment combinations. We found the greatest reduction in Phragmites cover when the native seed mix was sown 4 weeks prior to Phragmites, particularly at the higher native sowing density. A 2-week priority effect did not significantly benefit native species over Phragmites. These results suggest that native seed mixes in Great Salt Lake wetland restorations need to sown much earlier in the summer growing season than when Phragmites seeds germinate and at a very high density to reduce Phragmites cover overall. Though, managers may need to greatly reduce Phragmites seed densities in the seed bank and in the vicinity of restoration sites before revegetation efforts begin.

Hansen, Wade; Stockard, Alyssa; Anderson, Elizabeth; Yorgason, Jordan; Sudweeks, Sterling; Wu, Jie; Steffensen, Scott (Brigham Young University)
Faculty Advisor: Steffensen, Scott (Family, Home, and Social Sciences; Psychology); Yorgason, Jordan (Life Sciences, Physiology & Developmental Biology); Sudweeks, Sterling (Life Sciences, Physiology & Developmental Biology)

The prevailing view is that enhancement of dopamine (DA) transmission in the mesolimbic underlies the rewarding properties of ethanol (EtOH) and nicotine (NIC). Although the dogma is that EtOH enhancement of DA neural activity contributes to enhancement of DA transmission, DA neurons are not sensitive to rewarding levels of EtOH. However, VTA GABA neurons are sensitive to low-dose EtOH. We have shown previously that EtOH modulation of DA release in the NAc is mediated by α6-containing nicotinic receptors (α6*-nAChRs), that α6*-nAChRs mediate low-dose EtOH effects on VTA GABA neurons and EtOH preference, and α6*-nAChRs may be a molecular target for low-dose EtOH. The aim of this study was to evaluate EtOH effects on VTA GABAergic input to CINs and DA release in the NAc. Using DIO channel rhodopsin-2 (ChR2) viral injections into the VTA of VGAT Cre mice, we found that VTA GABA neurons send an inhibitory projection to CINs, replicating what has been demonstrated by others. Low-dose EtOH (IC50 = 10 mM) decreased optically-evoked IPSCs (oIPSCs) on CINs and enhanced (EC50 = 10 mM) CIN-mediated spontaneous DA release. Surprisingly, oIPSCs on CINs were not blocked by typical GABAA receptor (GABAAR) antagonists, but by GABAR rho-1 antagonists, suggesting involvement of atypical GABARs on CINs that are postsynaptic to VTA GABAergic input. The α6-conotoxin MII blocked the effects of EtOH on spontaneous DA release and optically-evoked DA release in choline acetyltransferase (ChAT) ChR2 mice. Chronic administration of NIC enhanced EtOH consumption in the drink-in-the-dark procedure and EtOH preference in the CPP procedure and concomitantly enhanced expression of α6*-nAChRs in VTA GABA neurons, without affecting other nAChR subunits. Taken together, these findings suggest that VTA GABA neuron inhibitory input to CINs is modulated by α6*-nAChRs and sensitive to low-dose EtOH, which may underlie the rewarding properties of EtOH.

Allen, Sierra; Meyer-Ficca, Mirella; Wandersee, Miles (Utah State University)
Faculty Advisor: Meyer-Ficca, Mirella (College of Agriculture and Applied Sciences; Animal, Dairy, and Veterinary Sciences Department)

Niacin, a component of vitamin B3, is necessary for the synthesis of nicotinamide adenine dinucleotide (NAD+). NAD+ is an essential coenzyme in several metabolic processes, including those that regulate glucose and fat homeostasis in the body. Niacin is available to humans in its dietary form through foods such as meat, various legumes, nuts and vegetables. Niacin deficiency has been linked to health problems including age-related decline of cognitive abilities, as seen in Alzheimer's disease, and impaired dermal repair. In cases of extreme niacin deficiency, individuals may even develop pellagra, a disease characterized by dermatitis, diarrhea and dementia. Recent studies in niacin deficient mice indicate that niacin deficiency impairs proper glucose metabolism. Compared to mice with adequate niacin levels, niacin deficient mice experience a significant loss of total body weight and body fat and have impaired glucose regulation in response to insulin. We hypothesize that these metabolic defects result from inadequate levels of NAD+ preventing the conversion of lactate to pyruvate in the gluconeogenesis pathway, which in turn results in decreased blood glucose levels. Another potential explanation is that niacin deficiency results in decreased glycogen stores in the liver, also impeding glucose production. To test these hypotheses, we are studying the relationship between dietary niacin and glucose metabolism in a transgenic mouse model with acquired niacin dependency that accurately represents human niacin metabolism. Results of this study will contribute to better understanding of niacin's role in proper glucose metabolism, with important implications for diabetes and other glucose-related diseases, particularly in populations with limited access to quality food.

Garg, Varun (University of Utah)
Faculty Advisor: Balagurunathan, Kuberan (University of Utah, College of Pharmacy; Medicinal Chemistry)

Heparin is a widely-used blood anticoagulant medicine that is used in surgeries and in treatment of circulatory system illnesses. Heparin is currently harvested from live pigs before they are slaughtered. There are many problems with the current production process of heparin. On a chemical level, the drug can be easily and accidentally altered due to its complex chemical nature. In addition, the environmental impact of the pigs that need to be raised on farms and fed is immense. These reasons and more are why bioengineering approaches towards the artificial synthesis of Heparin need to be researched. One of the major obstacles in the synthesis of heparin is the production of Low Molecular Weight (LMW) Heparosan, a chemical precursor. The research goal is to find methods to increase LMW Heparosan yields to a point where those same yields can be used to conduct further exploration into Heparosan oligosaccharide precursors. These oligosaccharides are useful in further understanding heparin structure-function relationships and will eventually help in the goal to find a commercially viable, cost and time effective method of heparin production. Using shake flask bacterial cultures, LMW Heparosan was produced while adjusting variables such as bacterial density at induction and incubation time to maximize yield. Once a sufficient yield was obtained, oligosaccharide structures spliced from the LMW Heparosan were classified for further research. The initial shake flask experiments showed increased yield and purity of Heparosan for each successive trial. Further work is required to scale up production of LMW Heparosan to a mass-market synthetic Heparin but the research conducted shows a promising method to synthesize and improve yields to make that possible.

Clarke, Eliza; Williams, Stephanie; Payne, Andrew; Obray, J Daniel; Yorgason, Jordan; Steffensen, Scott (Brigham Young University)
Faculty Advisor: Steffensen, Scott (Family, Home, and Social Sciences; Psychology)

Dopamine (DA) transmission is a key player in the rewarding aspects of ethanol as well as ethanol dependence. The current dogma is that DA transmission is increased during ethanol exposure via the inhibition of ventral tegmental area (VTA) GABA neurons and that excitation of VTA GABA neurons during withdrawal results in decreased DA transmission. Microglia, the major neuroimmune effector in the brain, may be a key mediator in this process by releasing cytokines following activation. It is also thought that BDNF may mediate this effect. We evaluated the effect of ethanol on cytokine concentrations in the VTA and nucleus accumbens (NAc), and found that low dose ethanol (1.0 g/kg) decreased interleukin (IL)-10 levels, but high dose ethanol (4.0 g/kg) increased IL-10 levels. We also used standard cell-attached mode electrophysiological techniques to evaluate the effects of select cytokines and BDNF on VTA neuron firing rate in vitro. We found no change in firing rate in response to IL-6 and BDNF, but an increase in firing rate in VTA DA neurons in response to IL-10. Consistent with the changes in firing rate, optically-evoked IPSCs were also found to be decreased in response to IL-10. Ex vivo voltammetry and in vivo microdialysis were done to determine whether IL-10 can directly result in an increase in DA release. Although ex vivo voltammetry showed no change in DA release, IL-10 increased DA release in vivo. These findings suggest that the rewarding and/or addictive effects of ethanol may be mediated by cytokines, specifically the anti-inflammatory cytokine IL-10.

Errigo, Isabella; Abbott, Benjamin; Reimer, Jessica; Glenn, Jeff; Chaney, Robert; Freeman, Andrew; Frei, Rebecca; Howe, Peter, Mendoza, Daniel; Kelly, Kerry; Summers, Laura; Johnston, James; Carter, Thom; Bratsman, Samuel; Stacey, Audrey; Wilson, Derrek; Lange, Leslie (Brigham Young University)
Faculty Advisor: Abbott, Benjamin (Life Sciences, Plant and Wildlife Sciences)

Recent medical and economic research has found that air pollution causes much more damage to our health and economy than previously understood. Globally, 16% of all deaths are attributable to air pollution—15 times more than from all wars and other forms of violence. However, translating these research findings into policy and behavior change at local levels remains a major challenge, partially because of mismatch between the spatial scale of the air pollution research (often national or global) and governance frameworks (typically multi-scale from local to regional). Here, we tested the effectiveness of expert assessment as a tool to resolve research-policy mismatch. We distributed a questionnaire to over 80 researchers living in Utah, asking for quantitative estimates of human health and economic costs of air pollution, and recommendations for what policy actions would be most effective at reducing those costs. Expert responses of air pollution costs varied widely, but were consistently higher than recent public health studies, indicating that experts were including a more complete suite of factors, or that they were biased. We discuss the response of Utah policymakers to these results and present a framework of involving local researchers to increase the assimilation of data into decision making.

Edvalson, Logan; Davis, Morgan; Busath, David (Brigham Young University)
Faculty Advisor: Busath, David (Life Sciences, Physiology & Developmental Biology)

A significant research focus in influenza pathogenesis has been directed towards growth factor receptor tyrosine kinases (RTKs) and their respective phosphorylation cascades. Several recent studies have implicated RTK signaling cascades, that are classically associated with cancer, with increased viral titer. A portion of these studies have focused on early segments of the signaling cascade while others' efforts focus in the late segments. Experiments performed in our lab have identified two receptor pathways—PDGF and VEGF—that, when the receptor inhibited, reduces the efficiency of the influenza virus. These data were achieved using compounds, and variants of compounds, already approved for human use in cancer. Although the drug oseltamivir is already approved for influenza treatment, there is concern for the development of viral drug resistance. The introduction of several types of infection blockers similar to the ones identified by our, and others, laboratories can mitigate viral resistance; like the introduction of several types of antibiotics has reduced bacterial resistance. We hypothesize that these pathways work in multiple parts of the infection cycle ranging from viral endocytosis to the budding off of new virions. Experiments are now under way to determine the specific interactions in these pathways that are important in the viral life cycle.

Wertz, Parker (Weber State University)
Faculty Advisor: Dorsey, Bryan (Weber State University, Geography)

Prevention and predicting spread is the best method of control against invasive species. Land managers require accurate and reliable methods for containment and eradication to prevent land cover change and loss of biodiversity. Ecological niche models exist and are used by ecologists to map habitat suitability, but many rely on presence-absence samples which are difficult to obtain. Maximum entropy species distribution modeling (Maxent) is a popular model that has been increasingly used since it can make valid predictions using presence-only data. Many studies have used Maxent to model species distributions, but few have done so with crowdsourced data since it is more likely to be bias and unreliable. The purpose of this study is to test the robustness of Maxent using crowdsourced presence-only data on Lyrthum salicaria, a perennial herb that invades wetlands and pushes out native flora. The study is set in northern and central Utah, and uses environmental variables in climate, landcover, and topography, with landcover being the most contributive factor to the model. Model performance was very good, even with species data being bias towards areas of higher population, proving Maxent as a worthy method to use in species distribution modeling with crowdsourced species presence data. This results of this study show promise for use in modeling other invasive plants in the future.

Johnson, Erik; Johnson, Ellie; Johnson; Jerald (Brigham Young University)
Faculty Advisor: Johnson, Jerald (Brigham Young University, Biology)

It seems counterintuitive that organisms should evolve handedness (or what we might more broadly refer to as "lateralization"). Individuals who can forage equally well with both hands, who can kick equally well with both feet, who can detect stimuli and orient equally well in both directions, and so on—these individuals should be favored relative to those who are either right handed or left handed. Yet in humans, and in several other species, handedness is common, but we still no very little about why. Here we explore this question using a tropical freshwater fish species with an unusual anatomy. Males have a modified fin—the gonopodium—that they use to internally inseminate females. Interestingly, males are either right or left handed for this structure, which terminates with either a dextral or sinistral twist. In this study, we ask a simple question: is there a link between male gonopodium morphology and male behavioral lateralization. We use a detour test approach to determine how males approach different stimuli, turning either to the left or right to more clearly see each type of stimulus. We focus on how males approach potential mates, predators, and novel items. We predict that males with a dextral gonopodium will orient differently than those with a sinistral gonopodium, consistent with the idea that there is link between behavioral lateralization and morphological handedness. If true, it would suggest that reproductive morphology could be linked to brain and behavioral lateralization in vertebrates.

Backman, Natalia; Ogden, Heath (Utah Valley University)
Faculty Advisor: Ogden, Heath (Utah Valley University, Biology)

Siphlonuridae is a family of mayflies (order Ephemeroptera) that are nicknamed the "Primitive" Minnow Mayfly family. The family traditionally has consisted of four genera; Edmundsius, Parameletus, Siphlonisca, and Siphlonurus, representing twenty six described species. The family Dipteromimidae was described as a sister group to the family Siphlonuridae (Tojo & Matsukawa, 2003), however, past molecular evidence suggests that Dipteromimidae might nest within Siphlonuridae(T. H. Ogden et al., 2009; T. Heath Ogden & Whiting, 2005). This study aims to use more taxa and more molecular data in order to generate more robust phylogeny for these mayflies. Specifically our goals are to (i) test the monophyly of the family Siphlonuridae; and (ii) compare traditional Sanger sequencing loci to newly generated phylogenomic data from a targeted capture sequencing approach.

Thatcher, Spencer; Eyere, Gloria (Dixie State University)
Faculty Advisor: O'Brien, Erin (College of Science, Engineering, and Sciences; Biological Sciences Department)

Dwarf bear-claw poppies (Arctomecon humilis Coville) are an endemic species of wildflower in Washington county Utah. These poppies only flower for about a month during the summer. There are currently seven known locations where these poppies are found. Conservation efforts to protect these populations includes research to understand the reproductive success of each site. Populations with low reproductive success may indicate the need for additional efforts or interventions to save this unique species. Four specific locations were monitored over a three-year period. Poppies in these areas were tagged and studied during their flowering seasons and individual inflorescences were bagged and collected to determine struggling locations and their correlating issues related to population decline. Seeds were split into two groups: immature and mature and were weighed and counted. A large percentage of immature seeds may indicate a resource or pollinator issue for the population. A low overall seed production may indicate that a resource limitation or other stressor is reducing the population viability.

Faulkner, Megan; Stoneham, Lisa; Brasso, Rebecka (Weber State University)
Faculty Advisor: Brasso, Rebecka (College of Science, Zoology)

Mercury is a toxic heavy metal that poses significant health risks to humans and wildlife. The organic form of mercury, methylmercury (MeHg), is converted from its inorganic form via microbial methylation primarily in aquatic systems. Methylmercury is dangerous because it attaches to proteins in blood and muscle and biomagnifies in food webs. The goal of this project, is to determine mercury concentrations in western spotted orb weaver spiders (Neoscona oaxacensis) collected from two sites on Antelope Island State Park. Previous studies have shown orb weavers associated with the Great Salt Lake ecosystem to accumulate significant methylmercury, connecting the aquatic and terrestrial ecosystems through a shared food web. The Great Salt Lake surrounding Antelope Island has historically shown some of the highest levels of Hg in surface waters in the United States and has both an abundance of orb weaver spiders and their preferred prey—brine flies. We tested the hypothesis that mercury concentrations in orb weaver spiders would differ between two sites on the island based on differences in environmental conditions (salinity) in the water where brine flies develop. All spiders were sexed, weighed, and individually analyzed for total mercury concentration using a Nippon MA-3000 Direct Mercury Analyzer.

Caten, Reilly; Valentine, Julie; Miles, Leslie (Brigham Young University)
Faculty Advisor: Valentine, Julie (Brigham Young University, Nursing); Leslie, Miles (Brigham Young University, Nursing)

In the United States, there is a push to mandate submission and testing of all sexual assault kits. A typically-overlooked benefit of testing sexual assault kits is the exoneration of wrongfully accused suspects. Sexual assault kits include DNA samples from the victim of sexual assault, and occasionally are submitted with DNA samples collected from the identified suspect for comparison. Inclusion of suspect samples is beneficial because it can lead to a DNA match with samples collected from the victim or exclude the suspect as the source of DNA. For a sexual assault kit to meet the criteria for "excluded the suspect" a DNA profile had to be developed from analysis of the sexual assault kit evidence which excluded the named suspect with submitted DNA sample.

A large retrospective study of 2,727 sexual assault kits with completed DNA analysis found 66 cases in which DNA findings excluded the suspect. Findings will be presented on descriptive data on cases in which the named suspect was excluded: relationship between victim and suspect, victim loss of consciousness/awareness at time of assault, alcohol/drug use during the assault, suspected drug-facilitated sexual assault, and multiple perpetrator sexual assault. Each of these cases excluding a suspect represents an individual who was erroneously identified, but DNA analysis findings excluded the identified suspect.

Testing sexual assault kits uses science to aid in the establishment of justice. Sexual assault kit testing transcends accusations and labeling to provide factual evidence supporting the claims of the innocent, whether they are identified as victim or suspect. Additionally, the liberation of an unjustly accused suspect promotes the correct identification and conviction of the responsible perpetrator. Thus, mandated testing of sexual assault kit promotes justice for victims of sexual assault and innocent suspects alike.

Smith, Hayden; Leavitt, Steve (Brigham Young University)
Faculty Advisor: Leavitt, Steve (College of Life Sciences, Biology)

Brigham Young University's Lichen Air Quality Biomonitoring Program (Herbarium of Non-Vascular Cryptogams) represents one of the largest and longest-running lichen biomonitoring programs worldwide, with nearly 500 permanent reference plots distributed across the Intermountain West. At each reference site, sensitive indicator lichens are selected for elemental analyses of 25 potential pollutants, with the aim of subsequent resampling every five to 15 years for ongoing evaluations of ecological health. Using elemental analysis (EA) data from the past 30 years, a model for large-scale monitoring has been developed with the aim to (i) improve interpretation of air quality using lichen bioindicators, (ii) establish a framework to integrate future EA samples for comparison to historical data, and (iii) develop a platform in the future to more effectively share these data with land management agencies, research groups, and the broader public. The model will be field-tested with new EA samples collected along the Wasatch Front.