Life Sciences

Brunetti, Bryce; Escarate, Ashley; Conway, Matthew; Slezak, Cyrill; Kopp, Olga (Utah Valley University)
Faculty Advisor: Kopp, Olga (Utah Valley University, Biology); Slezak, Cyrill (Utah Valley University, Physics)

Purpose:
This study evaluates the effect of electrohydraulic shockwaves on Staphylococcus aureus biofilms. This system could be a great alternative to the use of antibiotics, and potentially life-saving technology that could save billions of dollars.

Background:
The rise of antibiotic-resistant bacteria is a global threat. Staphylococcus aureus is typically harmless, but this gram-positive species has become highly resistant and extremely pathogenic. Strains like MRSA and VRSA have the highest rate of drug resistance and are the leading cause of chronic bacterial infections via bacterial biofilms on medical devices. Biofilms are an aggregation of microbes that excrete an extracellular matrix providing an ideal environment for gene exchange and quorum sensing. Their complexity hinders the diffusion of antimicrobials. A proposed method to prevent device-associated infection is shockwave sterilization and therapy. A shockwave is a high-energy wave causing a sudden change in temperature, pressure and density in the medium. This study investigates the potential disruption of bacterial biofilms by electrohydraulic shockwaves.

Methods:
E. coli and S. aureus biofilms were grown on polystyrene plates. Biofilms were treated with shockwaves (0.19mJ/mm2, 300 pulses, 3 Hz) in a water bath and compared with those treated with Vancomycin. Cell viability was determined through XTT/menadione absorbance and specific biofilm formation through crystal violet absorbance.

Results:
Current testing has shown that electrohydraulic shockwaves have a bacteriostatic effect on biofilms. Other finding show potential for shockwaves to increase bacterial susceptibility to lower levels of antibiotics.

Conclusions:
Device-associated infections are a serious threat to patients' health. The diminishing effectiveness of antibiotics in treating and preventing infections along with evolution of mass resistance in bacteria have given rise to the term "post-antibiotic era." The better understanding of electrohydraulic shockwaves bacteriostatic effect could lead to more effective treatments for antibiotic resistant bacteria such as S. aureus.

Savage, Ryland; Stevens, Andrew; Hicks, Joseph (Brigham Young University)
Faculty Advisor: Bailey, Bruce (Brigham Young University, Exercise Science)

Purpose: This study examined the effect of different intensities of exercise on subjective feelings of fatigue both immediately following exercise and after 60 minutes of intense cognitive testing in men and woman.
Methods: These results come from a secondary analysis of a larger randomized crossover study examining the different levels of exercise intensity on cognitive performance. We recruited 228 men and woman to participate in the study. Each participant was tested after three exercise conditions: moderate (35% VO2 max), vigorous (70% VO2 max), and sedentary (no exercise). Each exercise condition was randomized and each test was separated by one week. After each 40-minute exercise condition, we administered a visual analog scale to evaluate subjective feelings of fatigue. This assessment of fatigue was delivered before treatment, immediately after treatment and then again after a variety of cognitive tasks were performed for the duration of one hour.
Results: For the sedentary condition, feelings of fatigue increased after the 40-minute intervention (p<0.001) and decreased after 60 minutes of cognitive work but remaining elevated compared to baseline (p<0.01). For the moderate condition, feelings of fatigue did not change immediately after exercise (p=0.063) but then increased after 60 minutes of cognitive work (p<0.001). For vigorous condition, feelings of fatigue increased after exercise(p<0.001) and remained elevated after performing the cognitive tasks (p=0.163). Following the 40-minute intervention, fatigue was highest after the sedentary condition, followed by the vigorous condition and did not change after completion of the moderate condition. Following 60 minutes of cognitive work, fatigue was highest in the vigorous condition (p<0.001) and did not differ between the sedentary and moderate conditions (p=0.063).
Conclusion: The results of this study show that moderate exercise has no significant impact on feelings of fatigue but exercise at a higher intensity and being sedentary increase fatigue. Doing cognitive work increases fatigue if exercise precedes the tasks but being sedentary beforehand decreases feelings of fatigue during cognitive tasks. This suggests cognitive work is usually draining, but if performed after sedentary or low activity states such as watching TV, cognitive work will be invigorating and help feel more alert.

Leavitt, Amanda; Harris, Heather; Szanter, Kathryn; Stokes, Alexis (Weber State University)
Faculty Advisor: Dunn, Charles (Weber State University, Child and Family Studies); Hubler, Daniel (Weber State University, Child and Family Studies); Osai, Keith (Weber State University, Child and Family Studies)

How a child is parented can influence their success socially, mentally, physically, and emotionally. Agarwal (2017) states that "Parenting plays the most important part in any child's life, it can help a child by teaching them to deal with people, situations and adapt to a better living standard" (p.1335). Parents help form worldviews, shape a child's attitude towards personal achievement, teach how to approach adversity in life, and satisfy their needs whether it be psychological and/or physiological. Much is known about how the base of one's childhood is built upon one's primary caregivers' parenting style, however, less is known about the intergenerational transmission of parenting philosophies.

The current study was designed to assess how parenting styles affect child delinquency and bullying. Through social media invitations and snowball sampling, 200 people accepted invitations to participate in an online survey incorporating both open-ended and quantitative items. Participants were asked to reflect on how they were parented and then state what they have maintained or changed in their own parenting styles. Considering the rich nature of the responses to the qualitative items, a corroborative narrative came together through personal stories.

Through thematic analysis, several themes emerged. When participants reported being parented with: open communication, flexibility, love, trust, and higher expectations they wanted to keep those traits. When asked what participants carried on from their parents one participant stated, "Cherish the family and the moments we have together." Additionally, 28% (n = 113) of our participants shared the importance of spending quality time together. However, when participants' parents did not display those traits, most participants indicated that similar traits, namely communication, flexibility, love, quality time, trust, and higher expectations were desired in their homes. The findings from the current study can be used to inform future parenting research assessing influence on subsequent generations.

Jensen, Daelin; Baxter, Melanie (Brigham Young University)
Faculty Advisor: Tessem, Jeffery (Nutrition, Dietetics, and Food Science; Life Sciences)

Approximately 1.25 million people are currently living with type 1 diabetes. By 2050, 5 million people are expected to be diagnosed with the disease1. The insulin secreting pancreatic beta cells are essential to control proper glucose absorption and storage in insulin sensitive peripheral tissue. Both type 1 and type 2 diabetes are characterized by decreased functional beta cell mass and, consequently, decreased insulin production. One potential intervention is the use of beta cell transplantation from cadaveric donors. A major impediment to greater application of this treatment is the scarcity of transplant ready beta cells. Increasing the quantity of functional beta cells for transplantation will lead to increased insulin production and better management of the disease. Various genes have been defined that can induce beta cell replication. A major caveat of these findings, however, is that these factors induce replication in young beta cells but not in aged beta cells. Age-dependent morphological changes in the beta cell are poorly understood, despite its relevance to type 1 diabetes: here, we show that insulin-positive tissue area changes with age. Given that the majority of beta cells that will be used for transplant will come from aged donors, it is imperative to understand why aged beta cells are refractory to the aforementioned proliferative mechanisms. The cell cycle is tightly regulated by cyclin-dependent kinases. Cyclin-dependent kinase inhibitors (CDKI's) bind to cyclin dependent kinases, inhibiting cell proliferation. We hypothesized that these CDKIs are responsible for the observed lack of proliferation in aged animals. We demonstrate the expression of the Ink4 and Cip/Kip family of CDKI's by mRNA, protein and histological expression in 5 week and 5 month old primary rat beta cells. In addition, we show how size-related expression differences of CDKIs relate to beta cell proliferation.

Hannah A. Veltkamp, Sydney Houghton, Michael T. Stevens (Utah Valley University)
Faculty Advisor: Stevens, Micheal (Utah Valley University, Biology)

Netleaf hackberry (Celtis reticulata) is a deciduous shrub native to the southwestern United States and northern Mexico. Individual shrubs can be long-lived, but newly established stands of hackberry are rare. The lack of juvenile hackberry in the wild could be due to low germination rates reported in both laboratory and field settings. The seeds of hackberry are embedded in drupes that are an important source of food for birds and small mammals. Animals likely play an important role in seed dispersal, and passing through a digestive tract could increase the germination rates of hackberry seeds. Passage through the digestive tract of a mammal can increase the germination rates for some plant species, but not for others. We hypothesized that passage through the digestive tract of a coyote would increase the germination rates of C. reticulata. To test this hypothesis, we collected 17 coyote scats containing visible hackberry fruits from along the Bonneville Shoreline Trail east of Provo, Utah, using latex gloves. Each scat location was recorded using a GPS unit. After collecting each scat, we found the closest hackberry shrub and picked a sample of fresh hackberry fruits from it. All samples were cleaned and cold stratified and then planted into cone-tainers containing a potting soil mix and placed in the Utah Valley University greenhouse. We sowed 20 seeds from each of the 17 coyote scats and

20 seeds from each of the neighboring hackberry bushes for a total of 680 seeds. The 680 cone-tainers were labeled with plastic stakes and randomly positioned into trays that were randomly distributed on a bench in the greenhouse. The seeds, and later seedlings, were watered as needed (typically three days/week). On watering days, we checked for newly-germinated hackberry seedlings and recorded their date of emergence. Near the end of the experiment, we measured the height of each seedling. The germination rate of hackberry seeds that had passed through the

digestive tract of a coyote did not differ from the germination rate of seeds from fresh-picked fruit (42.7% vs. 46.5%, respectively; _ 2 = 0.558, df = 1, p = 0.455). However, on average, the coyote-treatment seeds took just over half as many days to germinate as did the seeds from fresh-picked (undigested) fruit (35 days vs. 69 days, respectively; p < 0.001). The seedlings from coyote-treatment seeds were 9.5% taller than were the seedlings derived from seeds from undigested fruit (6.4 cm vs. 5.8 cm, respectively; p < 0.001). Our results show that consumption by coyotes can benefit hackberries by enabling their seeds to germinate earlier in the year when

conditions for establishment are good. The earlier start on germination that coyote-ingested hackberries get translates to increased height and likely a higher rate of survival in the field.

Elison, Weston; Bauchle, Casey; Bunker, Libby; Stephens, Samuel; Tessem, Jeffery (Brigham Young University)
Faculty Advisor: Tessem, Jeffery (Brigham Young University; Nutrition, Dietetics and Food Science)

Type 2 Diabetes (T2D) effects hundreds of millions of people worldwide, with that number increasing rapidly. It is characterized by increased insulin resistance and dysfunctional insulin secretion. The beta cell of the pancreas is the primary insulin secreting tissue, found in the endocrine tissue of the pancreas called islets of Langerhans. In T2D beta cells become glucose intolerant and disease progression is characterized by loss of functional beta cell mass. Previous studies have shown that the transcription factor Nkx6.1 is vital for beta cell differentiation, identity, and insulin secretion. Research has indicated that Nkx6.1 expression and protein levels decrease in pancreatic islets from human donors with T2D. Our data indicates that glucolipotoxicity, a common model for obesity and diabetes in cell culture, leads to decreased Nkx6.1 mRNA expression, protein levels and nuclear localization in Ins-1 832/13 cells. Nkx6.1 regulates genes in the nucleus , and its loss inhibits proper insulin secretion. We propose that reactive oxygen species created by metabolism of excess fuel decreases Nkx6.1 expression and Nkx6.1 target gene expression, as measured by quantitative polymerase chain reaction (qPCR). Also, increased glucose concentrations causes increased Nkx6.1 protein degradation and translocation out of the nucleus. Protein levels will be measured by western blot and localization by confocal microscopy. In order to understand how these changes effect beta cell function, we will measure glucose stimulated insulin secretion by sandwich Enzyme Linked Immunosorbent Assay (ELISA). We further propose that Nkx6.1 overexpression will restore beta cell function. These results will assist in unraveling the cause of beta cell dysfunction in T2D.

Karin, Kettenring; Robison, Talin; Leonard, Emily (Utah State University)
Faculty Advisor: Kettering, Karin (S.J. & Jessie E. Quinney College of Natural Resource, Watershed Sciences Department)

The Great Salt Lake (GSL) and its wetlands are important habitat for migrating birds. The GSL wetlands provide crucial habitat for nesting, food, and areas to recover from migration. Common carp are a threat to GSL wetlands. Carp disturb sediments in the water, blocking some of the sunlight from entering the water, which is utilized by aquatic macrophytes and algae. Carp also may be affecting invertebrate populations, which are critical food resources for migrating birds, but these effects have not been well-documented. My research addressed the question: what are the effects of invasive common carp on invertebrate food sources for diving ducks in the Great Salt Lake wetlands? I answered my research question by addressing the following objectives: (1) to identify the benthic, epiphytic, and water-column dwelling invertebrates in Farmington Bay Waterfowl Management Area (WMA), and (2) to determine if common carp are having an impact on the overall density, diversity, and abundance of the invertebrate communities fed on by diving ducks. I compared invertebrate communities (diversity and abundance) between carp-excluded boxes and control boxes. I constructed my carp exclosures of wire mesh and t-posts to prohibit carp from entering while still allowing invertebrates and water to freely move in and out of the exclosure. The control boxes were constructed of t-posts and allowed carp to freely enter and exit the box. I used dipnet and substrate core samples to determine what invertebrates are living in the water column and substrates at Farmington Bay wetlands. Although sample processing is on-going, early results indicate that carp reduce water column invertebrate abundance while effects on invertebrate diversity are thus far inconclusive. Given the importance of GSL wetlands and their invertebrate food sources to migrating diving, my research findings underscore the importance of aggressive carp management.

Smith, Mick; Desdames, Chloe (University of Utah)
Faculty Advisor: Seaboch, Melissa (University of Utah, Anthropology)

Census and sampling work are important because they provide critical information on population size, distribution, and habitat preference — all important factors in conservation. La Selva Biological station is located on the north eastern side of Costa Rica and is a protected biological reserve. It is home to three species of primates including Alouatta palliata, commonly known as the mantled howler monkey. It is comprised of primary forest that has been undisturbed by human forces and secondary forest that is regenerating from past disturbances, such as deforestation. Past research conducted on howler monkeys shows they prefer primary forest over secondary because primary forests have higher species richness and a wider range of trees which provides food for howler monkey's selective diet. I predict that the majority of A. palliata in Costa Rica will be located in primary forest because it offers more resources. I censused 11 established trails at La Selva (two trails in primary forest, seven trails in secondary forest, and two trails crossing both forest types). For each howler monkey encountered, I recorded the location, forest type, and group size. I identified four different groups of A. palliata with group size ranging between 6-10 individuals. One group was located in primary forest and three groups in secondary forest; thus, my hypothesis that A. palliata would prefer primary forests was not supported. Anecdotally, A. palliata were observed more frequently around rivers or streams. This could indicate that rather than being concerned with primary versus secondary forest, they prefer riparian habitats found along the banks of rivers or other actively moving sources of water. A study conducted by Stoner found howler monkeys in riparian habits supporting this hypothesis. This type of research continues to provide critical information for understanding primate's habitats which helps with conservation of species.

Wasden, Kayla; Suisse, David; Kaundal, Amita (faculty mentor) (Utah State University)
Faculty Advisor: Kaundal, Amita (College of Agriculture and Applied Sciences; Plants, Soils, and Climate Department)

Many plants secrete substances to create a more favorable environment, including chemicals that kill pathogenic microbes or competing plants. Artemisia tridentata, also known as "Big Sagebrush," is prevalent in the Rocky Mountain region of the United States and is known to have antimicrobial capabilities. We will study the potential antimicrobial activity of Artemisia tridentata.

Studies report that chemicals released by the leaves and branches of A. tridentata affect bacteria native to deer rumen. Another study showed that 27 actinomycetes (anaerobic bacteria that form colonies) strains found in the rhizosphere of A. tridentata demonstrated antibacterial activities when tested on E. coli, Bacillus subtilis and Staphylococcus aureus. Native Americans traditionally used A. tridentata to relieve stomach pain, colds, coughs, sore eyes, snake bites and as an insect repellent. Researchers found several compounds, including flavonoids, that can affect antimicrobial activity. Articles regarding antimicrobial activities in A. tridentata were published between 1967 and 2004. With the chronological gaps and considering the progress that biological and molecular technology has made in recent years, knowledge of the chemicals released by A. tridentata lies largely untapped. In this study, we will investigate the antimicrobial activities of the leaves, stem, roots, and flowers of A. tridentata initially by the agar well diffusion method and followed by validating with the agar disk diffusion method. We will check the antimicrobial activity of the extract from different plant parts of A. tridentata on common bacteria such as E. coli, Bacillus subtilis, and some Pseudomonas spp. of plant pathogens.

The knowledge obtained from this research will further help in the identification and characterization of the secondary metabolites or chemicals involved in antimicrobial activity of sagebrush. Medicinal plants provide a healthy, natural alternative to conventional medication, and may lead to new insights on antibiotics and pharmaceuticals. Besides, Artemisia tridentata is a plant native to Utah and Idaho. It grows everywhere in the surrounding area, making it inexpensive (free) to produce.

Bartlett, Ashley; Phatak, Sumira; Hintze, Korry; Benninghoff, Abby (Utah State University)
Faculty Advisor: Benninghoff, Abby (College of Agriculture and Applied Sciences; Animal, Dairy, and Veterinary Sciences Department)

The gut microbiome modulates various physiological functions related to cancer development including inflammation, cell proliferation, apoptosis, and angiogenesis. Patients with inflammatory bowel disease have a microbiome distinct from healthy controls with consistent observations of reduced gut biomass, decreased diversity within the community, and altered relative abundance. Although a consensus cancer-related microbiome has not been identified, several pathogenic species play an instrumental role in the progression of colitis and tumorigenesis, including: Streptococcus bovis, Helicobacter pylori, Enterococcus faecalis, Clostridium septicum, and Escherichia coli. Gut microbial composition is highly responsive to diet and inadequate intake of micronutrients is a critical feature of the Western dietary pattern. Gut dysbiosis has been proposed to further limit mineral uptake and impair vitamin synthesis, predisposing the host to micronutrient deficiency. Dietary bioactives, such as those in green tea, may function as a mediator between the gut microbiome and basal diet to ultimately prevent colitis associated colorectal cancer (CAC). The overarching objective of our work is to determine the impact of ancestral or multi-generational consumption of the total Western diet (TWD) in a murine model of CAC. Our previous work is the first to investigate how diet induced transgenerational inheritance affects CAC outcome. Our data suggested that multigenerational patterns of exposure to the TWD altered both phenotype and gene expression in third generation offspring. Supplementation with green tea appeared to be most promising after consumption of TWD for multiple generations. Considering that gut microbes are inherited maternally after colonization during vaginal birth, the gut microbiome is a missing piece in this disease model puzzle. The hypothesis of our current project is to investigate whether intake of TWD influences the transmission of microbes and whether CAC outcome is reflected by altered gut microbial composition. Based on other work, we expect the healthy control to possess an abundance of varied bacterial taxa that maintain protective epithelial barrier function and overall homeostasis. On the other hand, a high fat diet would promote increased intestinal permeability, a substantial shift at the phyla level, and increased production of pro-inflammatory cytokines. After TWD consumption, we expect an overall negative phenotypic outcome within the gut microbiome, that includes a breakdown of the epithelial barrier and introduction of pathogenic bacteria. These harmful bacteria tend to thrive on simple sugars that are common in the Western dietary pattern and tend to produce metabolites known as endotoxins that promote dysbiosis.

Shin, Seungwon (Salt Lake Community College)
Faculty Advisor: Seaboch, Melissa (Salt Lake Community College, Anthropology)

The abundance of collared peccaries (Pecari tajucu) is crucial to study because they are a keystone species that plays a large role in their ecosystems. They consume fallen fruits and nuts, disperse seeds, and provide food for predators. Additionally, they are ecosystem engineers altering the landscape for other species. Previous studies have shown that collared peccaries at La Selva Biological Station travel in smaller groups (averaging 10 individuals per group) compared to peccaries at other Neotropical sites. La Selva Biological Station is located in northeastern Costa Rica and it consists of both primary and secondary (i.e. degraded) forests surrounded on three sides by farmland. Due to the general decline of mammals in degraded habitats, I predicted that the average group size of collared peccaries at La Selva will be even smaller than previously reported. I collected data at La Selva Biological Station for two weeks in May 2019. I used three census methods: total count sampling (counting all the species in a certain area), line transect sampling (counting all the species I see when I walk through a trail), and point sampling (standing at selected viewpoints and recording the species visible from that location). I observed 39 peccaries in 17 separate sightings. Group size ranged from 1 to 7 peccaries with an average of 2.3 peccaries per group. Eight sightings (20%) were of single peccaries. My hypothesis that peccary group size would be smaller than 10 individuals was supported. Some limitations of the study were low visibility due to the dense forest and the dispersed social organization of peccary individuals within the group. Both of these factors would underestimate the actual group size of collared peccaries. Nevertheless, the results support previous findings that peccary group size at La Selva are smaller than at other Neotropical sites.

Tuttle, Jared; Payne, Andrew; Obray, J Daniel; Steffensen, Scott (Brigham Young University)
Faculty Advisor: Steffensen, Scott (Family, Home, and Social Sciences; Psychology)

A subpopulation of ventral tegmental area (VTA) GABA neurons express connexin-36 (Cx36) gap junctions (GJs). Activation of GJ-mediated electrical coupling between VTA GABA neurons supports brain stimulation reward and alcohol reward is lowered in Cx36 KO mice due to a hyper-dopamine (DA) state. The aim of this study was to further evaluate the role of a subpopulation of Cx36+ VTA GABA neurons in alcohol reward and dependence. To accomplish this study, we customized a Gq-coupled Designer Receptors Exclusively Activated by Designer Drugs (DREADDs) viral vector to only express in Cx36+ neurons (AAV8.hCx36.hM3D(Gq)-mCherry.WPRE.rBG) in the VTA. The hM3Dq viral vector was infused into male CD-1 GAD GFP mice and male Wistar rats. The animals were then given 10-14 days to recover prior to experimentation. A control virus (AAV9.CB7.CI.mCherry.WPRE.rBG) was used for comparison. We implemented standard cell-attached mode electrophysiology to evaluate the effects of clozapine-n-oxide (CNO; the ligand for DREADDs) on VTA GABA and DA neuronal activity. We found a robust enhancement of VTA GABA neuron firing rate in hM3Dq+ neurons with 20 _M CNO ex vivo. Surprisingly, while investigating CNO effects on VTA DA neuron firing rate, we found that CNO activation of hM3Dq+ VTA GABA neurons increased DA neuron activity, suggesting that Cx36+ VTA GABA neurons indirectly modulate local VTA DA neurons. Intraperitoneal CNO (3 mg/kg) also enhanced the firing rate of VTA GABA neurons in vivo. Administration of CNO reduced ethanol consumption (drink-in-the-dark paradigm) in both ethanol naïve and ethanol dependent hM3Dq-injected mice as compared to controls, suggesting that activation of Cx36+ neurons in the VTA is enough to block ethanol consumption in both naïve and dependent animals. Taken together, these findings support previous studies indicating that enhanced electrical coupling between VTA GABA neurons is rewarding and promotes reward and lowers the hedonic value of ethanol.