Physical Sciences
From Ancient Cyanobacteria to Future Tech: The Chemistry of Dipyrroles
Author(s): Jaren Meikle, Samuel Archer
Strain-Driven Metal-to-Insulator Transition and Ferroelectricity in WTe₂
Author(s): Ross Richins
Encapsulation of Chemotherapeutic Temozolomide in Bovine-Milk Derived Extracellular Vesicles
Author(s): Charlee Cannon, Torrance Johnson, Caleb Weaver
Modifying the Light-Harvesting Capabilities of Phycocyanin using Rhodamine-B
Author(s): Brecken Shakespeare, Colton Koch
Microplastics in Soil: Testing Detection Limits with FTIR and DSC
Author(s): Jenna Olivier
The study of urea on protein biomarker detection by quantum dots
Author(s): Daniel Jensen, Caitlin West
Differences between sexes in spatial visualization and memorization in organic chemistry
Author(s): Dagney Goodfellow, Lauren Jensen, Derek Baker, Seunghwan Shin
Identification of Environmental Microplastics Using Raman Spectroscopy
Author(s): Courtney J. Ebert, Korryn Narvaez, Eliza Ballantyne, Stone Smith, Reece Anderson
Geochemical Analysis of Amphiboles at Mt Hillers, UT
Author(s): Zoe Fischer, Parker Tenney, Chloe FitzGerald Taylor, Logan Chappell, Spencer Hahnem
Brain-eating Amoeba: A Multi-drug Study to Combat Naegleria fowleri and Improve Survival Rates
Author(s): Victoria Green, Ethan Jensen, Ethan Stryker
Exploring Urban Wildlife Management Plans: A Case Study in Cedar City
Author(s): Jhen Allison Seguiwan
Insights into hydrogen storage utilizing cyclic amino-borane complexes
Author(s): Jordan Colmenero
Optimization of Cannabinoid Permeation Agents for Transdermal Delivery Applications
Author(s): Madison Bulloch, Alexia Casillas
Testing of an Acousto-Optic Modulator for Implementation as a Laser Q-Switch
Author(s): Micah Laing, Benjamin Holt
Increased Efficiency in Nonlinear Wireless Power Transfer
Author(s): Zachary Butler, Kendall Rosenkrantz, Yoonji Yo
Student's perceptions on the use of Virtual Reality in organic and inorganic chemistry
Author(s): Isabelle Smith, Alexandra Routsis, Laryssa Larson, Josie Wright, Kaden Jensen
Optimizing Continuous-wave Nd:YVO4 Laser Performance for Longwave Infrared Generation
Author(s): Benjamin Holt, Alex Gibb, MicahLaing
Fluoride Speciation Analysis of the Great Salt Lake Utah
Author(s): Danielle Kemmer, Dillon Reynolds, Alyssa Brown, Benjamin Judd, Dean V. Smith, Tyler Jenkins, Asha Ahmed, Amber Thornton Miller, Dylan Jenkins, Nashly Cruz-Guzman
Lensless High-Resolution Imaging with Laser Interference
Author(s): Ulises Thornock, Brian Weaver, Jackson Phippen
Synthesis and Characterization of Novel Pterostilbene Derivatives for Potential use as Therapeutics
Author(s): Austin Lamoreaux
Quantitation of Trace Oxygen in Anoxic Water Implementing a Microfluidic Device
Author(s): Corban Kerr, Kason Stinson
Synthesis of Chiral ɑ-Amino Boronates via a 3-Component Coupling Reaction
Author(s): Anna Page
Tectonic History of the Rio Grande Rift Through a Study of Sediment Provenance
Author(s): Brian Angell
A Pilot Study Investigating Virtual Reality for Chemical Education
Author(s): Kaden Jensen
Creating a New Distance Ladder with Surface Brightness Fluctuations
Author(s): Mikaela Cowles
Seven potential double star systems in the stellar association WSD 05205+3654
Author(s): Stryder Wiese
Optical Scattering for Rapid UTI Detection
Author(s): Feng Guo, Elise Bauer, Kimball Henstrom, Caroline Torgersen, Hannah Thrupp, Isaac Zabriskie, Alex Martinez, Keaton Fuller, Clint Flinders
Use of a Portable Handheld X-Ray Fluorescence Unit (pXRF) to Measure Alteration in Exhumed Fault Zones: Implications for Hydrologic Rock Properties and Injection Induced Seismicity
Paulding, Anna (Utah State University)
Faculty Advisor: Bradbury, Kelly (College of Science, Geosciences Department)
A dramatic increase in seismicity has occurred in the midcontinent region since 2009 (Rubinstein and Mahani, 2015), causing public concern for the stability of infrastructure and buildings. Several studies have directly linked this seismicity to the reactivation of buried fault systems near the Paleozoic sedimentary bedrock-Precambrian crystalline basement contact as a result of high volumes of injection of wastewater produced by the oil and gas industry (Ellsworth, 2013; Keranen et al., 2013).
The reactivation of fault zones due to fluid injection is not only influenced by injection rates but also by the ability of fluids to migrate along or across the contact, which is controlled by the rock properties and geologic setting. To better understand the rock property variations that may occur along the nonconformity interface, we use an outcrop analog site of an exhumed fault near Gunnison, Colorado. My undergraduate research focuses on using a portable handheld X-Ray Fluorescence Unit (pXRF) as a tool to measure compositional variations in outcrop. To directly compare data, a calibration using 16 USGS Concentration Standards as well as 12 analog samples will be used to create a calibration optimized for this specific suite of rocks which informs the accuracy of in-situ field data measurements against laboratory measurements of powdered samples, influencing how future pXRF measurements can be analyzed. Micro-scale variations of major and trace element concentrations reflect alteration and related fluid-rock interactions and may serve as a proxy for fluid migration along or across faulted sections of a nonconformity interface. I propose that calibrated pXRF data and whole rock XRF data is a useful tool for understanding the nature and degree of rock alteration in fault zones and across analog sites nonconformity interface. These data can aid in a more broad understanding of how pXRF data can be used in the field to characterize the nonconformity interface and fault zones.
Faculty Advisor: Bradbury, Kelly (College of Science, Geosciences Department)
A dramatic increase in seismicity has occurred in the midcontinent region since 2009 (Rubinstein and Mahani, 2015), causing public concern for the stability of infrastructure and buildings. Several studies have directly linked this seismicity to the reactivation of buried fault systems near the Paleozoic sedimentary bedrock-Precambrian crystalline basement contact as a result of high volumes of injection of wastewater produced by the oil and gas industry (Ellsworth, 2013; Keranen et al., 2013).
The reactivation of fault zones due to fluid injection is not only influenced by injection rates but also by the ability of fluids to migrate along or across the contact, which is controlled by the rock properties and geologic setting. To better understand the rock property variations that may occur along the nonconformity interface, we use an outcrop analog site of an exhumed fault near Gunnison, Colorado. My undergraduate research focuses on using a portable handheld X-Ray Fluorescence Unit (pXRF) as a tool to measure compositional variations in outcrop. To directly compare data, a calibration using 16 USGS Concentration Standards as well as 12 analog samples will be used to create a calibration optimized for this specific suite of rocks which informs the accuracy of in-situ field data measurements against laboratory measurements of powdered samples, influencing how future pXRF measurements can be analyzed. Micro-scale variations of major and trace element concentrations reflect alteration and related fluid-rock interactions and may serve as a proxy for fluid migration along or across faulted sections of a nonconformity interface. I propose that calibrated pXRF data and whole rock XRF data is a useful tool for understanding the nature and degree of rock alteration in fault zones and across analog sites nonconformity interface. These data can aid in a more broad understanding of how pXRF data can be used in the field to characterize the nonconformity interface and fault zones.
The Role of Auxin in Growth Promotion of Rice by Rhizobium sp. IRBG74
Watts, Austin; Crook, M. B. (Weber State University)
Faculty Advisor: Crook, Matthew (College of Science, Microbiology)
Auxin is a known growth hormone for plants and many plant-beneficial bacteria are known to produce it. It has previously been shown that Rhizobium sp. IRBG74 promotes growth of rice, but the mechanism is unknown. We hypothesized that Rhizobium sp. IRBG74 accomplishes this by production and secretion of auxin. To address this hypothesis, we first performed a bioinformatic analysis to identify putative auxin biosynthesis genes in the genome of IRBG74 using BLAST with known auxin biosynthesis genes as queries. To test whether the genes identified by BLAST play a role in promoting growth of rice, we are making in-frame deletions of each one. Briefly, we use overlap-extension PCR to create and stitch together deletion fragments and then we clone these fragments into the sacB deletion vector pJQ200SK. The target genes are then disrupted by homologous recombination and then deintegration is selected for with sucrose. After this is done we test the mutant to verify the deletion occurred by PCR. Once the deletion mutants are verified, each one is tested on rice seedlings and compared to wild-type IRBG74. Rice growth is quantified by shoot dry weight and by root branching, as measured using ImageJ.
Faculty Advisor: Crook, Matthew (College of Science, Microbiology)
Auxin is a known growth hormone for plants and many plant-beneficial bacteria are known to produce it. It has previously been shown that Rhizobium sp. IRBG74 promotes growth of rice, but the mechanism is unknown. We hypothesized that Rhizobium sp. IRBG74 accomplishes this by production and secretion of auxin. To address this hypothesis, we first performed a bioinformatic analysis to identify putative auxin biosynthesis genes in the genome of IRBG74 using BLAST with known auxin biosynthesis genes as queries. To test whether the genes identified by BLAST play a role in promoting growth of rice, we are making in-frame deletions of each one. Briefly, we use overlap-extension PCR to create and stitch together deletion fragments and then we clone these fragments into the sacB deletion vector pJQ200SK. The target genes are then disrupted by homologous recombination and then deintegration is selected for with sucrose. After this is done we test the mutant to verify the deletion occurred by PCR. Once the deletion mutants are verified, each one is tested on rice seedlings and compared to wild-type IRBG74. Rice growth is quantified by shoot dry weight and by root branching, as measured using ImageJ.
The utilization of UV-light and digital photography to measure chemical concentrations during an organic reaction.
Terreros, Eduardo N.; Dr. Roberts, Andrew G. (University of Utah)
Faculty Advisor: Roberts, Andrew G. (University of Utah, Chemistry)
Chromatography is an indispensable tool in most chemistry laboratories, as it provides a way to separate multiple components within a chemical mixture. The separation can be evaluated by the use of various chromatographic methodologies that have been developed to target specific chemical properties (e.g. size, mass, molecular interactions) of the desired compounds. Chromatographic methods are utilized to gather qualitative information in order to observe more general trends, or quantitative data to further explore observations in greater detail.
Thin Layer Chromatography (TLC) is a well-established method for collecting qualitative data from chemical reactions. Although Quantitative TLC (QTLC) methods have been developed, they are limited due to their high complexity, and cost prohibitive nature. The advancement of a Semi-Quantitative Thin Layer Chromatography (S-QTLC) method will provide a quick, low cost method to track organic reactions. We developed a low-cost alternative that uses readily available materials to gather images of TLC plates and process them into semi-quantitative data. In order to achieve this, we have constructed a small image gathering box made of opaque acrylic fitted with two 254 nm UV lamps and a Raspberry Pi Zero W with a camera module to acquire the images. The images are imported to a PC and processed by a custom built MatLab function. We demonstrated that this system can be utilized to gather qualitative data. Current studies will validate semi-quantitative data collection and reaction tracking and work is currently being done to validate semi-quantitative data collection.
Faculty Advisor: Roberts, Andrew G. (University of Utah, Chemistry)
Chromatography is an indispensable tool in most chemistry laboratories, as it provides a way to separate multiple components within a chemical mixture. The separation can be evaluated by the use of various chromatographic methodologies that have been developed to target specific chemical properties (e.g. size, mass, molecular interactions) of the desired compounds. Chromatographic methods are utilized to gather qualitative information in order to observe more general trends, or quantitative data to further explore observations in greater detail.
Thin Layer Chromatography (TLC) is a well-established method for collecting qualitative data from chemical reactions. Although Quantitative TLC (QTLC) methods have been developed, they are limited due to their high complexity, and cost prohibitive nature. The advancement of a Semi-Quantitative Thin Layer Chromatography (S-QTLC) method will provide a quick, low cost method to track organic reactions. We developed a low-cost alternative that uses readily available materials to gather images of TLC plates and process them into semi-quantitative data. In order to achieve this, we have constructed a small image gathering box made of opaque acrylic fitted with two 254 nm UV lamps and a Raspberry Pi Zero W with a camera module to acquire the images. The images are imported to a PC and processed by a custom built MatLab function. We demonstrated that this system can be utilized to gather qualitative data. Current studies will validate semi-quantitative data collection and reaction tracking and work is currently being done to validate semi-quantitative data collection.
Using Redox Active Polymers as Anode and Cathode Species in Redox Flow Batteries
Leininger, Sara; Minteer, Shelley; Rhodes, Zayn; Sigman, Matt; Pancoast, Adam (University of Utah)
Faculty Advisor: Minteer, Shelley (University of Utah College of Science, Chemisty)
In the effort to improve renewable energy as a response to the depletion of fossil fuels, one important aspect to consider is the availability of such sources. The supply of solar and wind power, for example, faces issues with intermittency. Therefore, it is crucial to develop reliable energy storage methods, with redox flow batteries (RFBs) being of particular interest given their potential low cost and high efficiency. RFBs operate similarly to conventional batteries, except the anode and cathode materials are dissolved in electrolyte solutions, and pumped into the electrochemical cell from external storage tanks. Within the cell, the anode and cathode species are separated by a membrane to prevent them from mixing, which would cause the battery to self-discharge. RFBs can utilize aqueous- or organic-based electrolyte solutions, with organic solvents being especially appealing, as the electrochemical potential window is larger than water. However, one major impediment of using organic solvent is the high chemical crossover rate of anode and cathode species through the membrane, causing rapid capacity fade of the battery. Several research studies have shown that the use of redox active polymers (RAPs) with high molecular weights, paired with a size-exclusion membrane effectively counteracts this problem. The resulting steric hindrance between the small pores of the membrane and these large molecules blocks any crossover from the active species. This study will include the construction of an RFB using two previously developed RAPs demonstrated to have high electrochemical cycling stability as electrolytes. By using RAPs as both anode and cathode materials, it is expected that chemical crossover will be minimized, and the lifetime of the battery will be elongated compared to an RFB with one or both species in monomeric form. This study will be significant in the advancement of RFBs, potentially leading to their widespread use for energy storage.
Faculty Advisor: Minteer, Shelley (University of Utah College of Science, Chemisty)
In the effort to improve renewable energy as a response to the depletion of fossil fuels, one important aspect to consider is the availability of such sources. The supply of solar and wind power, for example, faces issues with intermittency. Therefore, it is crucial to develop reliable energy storage methods, with redox flow batteries (RFBs) being of particular interest given their potential low cost and high efficiency. RFBs operate similarly to conventional batteries, except the anode and cathode materials are dissolved in electrolyte solutions, and pumped into the electrochemical cell from external storage tanks. Within the cell, the anode and cathode species are separated by a membrane to prevent them from mixing, which would cause the battery to self-discharge. RFBs can utilize aqueous- or organic-based electrolyte solutions, with organic solvents being especially appealing, as the electrochemical potential window is larger than water. However, one major impediment of using organic solvent is the high chemical crossover rate of anode and cathode species through the membrane, causing rapid capacity fade of the battery. Several research studies have shown that the use of redox active polymers (RAPs) with high molecular weights, paired with a size-exclusion membrane effectively counteracts this problem. The resulting steric hindrance between the small pores of the membrane and these large molecules blocks any crossover from the active species. This study will include the construction of an RFB using two previously developed RAPs demonstrated to have high electrochemical cycling stability as electrolytes. By using RAPs as both anode and cathode materials, it is expected that chemical crossover will be minimized, and the lifetime of the battery will be elongated compared to an RFB with one or both species in monomeric form. This study will be significant in the advancement of RFBs, potentially leading to their widespread use for energy storage.
Harmonic analysis of mid-latitude temperatures in the mesopause region: TIME-GCM results and sodium resonance lidar observations during 2009
Cutler, Alynne; Hagan, Maura; Yuan, Titus (Utah State University)
Faculty Advisor: Hagan, Maura (College of Science, Physics Department); Yuan, Titus (College of Science, Physics Department)
Analyses of sodium resonance lidar temperature measurements made during a three-day period in August 2009 in the mesopause region (ca. 70-120km) above Fort Collins CO, along with analyses of correlative temperature predictions from the Thermosphere-Ionosphere-Mesosphere-Electrodynamics General Circulation Model (TIME-GCM) reveal diurnal and semidiurnal temperature variations characteristic of solar atmospheric tides. Harmonic analyses via Fourier decomposition of the lidar data reveal a dominant semidiurnal oscillation with amplitudes that are well-represented in TIME-GCM at altitudes below about 92 km. A comparatively weaker diurnal tide was detected in the lidar data. This variation is negligible in the TIME-GCM results below 95km. Downward phase progression associated with upward propagating tides characterizes both tidal model and measurement results. Comparisons between August 2009 mean temperature profiles reveal a cold bias of ~17K in the TIME-GCM mesopause region. Equivalent analyses of temperature during a second three-day period in January 2009 remain in progress.
Faculty Advisor: Hagan, Maura (College of Science, Physics Department); Yuan, Titus (College of Science, Physics Department)
Analyses of sodium resonance lidar temperature measurements made during a three-day period in August 2009 in the mesopause region (ca. 70-120km) above Fort Collins CO, along with analyses of correlative temperature predictions from the Thermosphere-Ionosphere-Mesosphere-Electrodynamics General Circulation Model (TIME-GCM) reveal diurnal and semidiurnal temperature variations characteristic of solar atmospheric tides. Harmonic analyses via Fourier decomposition of the lidar data reveal a dominant semidiurnal oscillation with amplitudes that are well-represented in TIME-GCM at altitudes below about 92 km. A comparatively weaker diurnal tide was detected in the lidar data. This variation is negligible in the TIME-GCM results below 95km. Downward phase progression associated with upward propagating tides characterizes both tidal model and measurement results. Comparisons between August 2009 mean temperature profiles reveal a cold bias of ~17K in the TIME-GCM mesopause region. Equivalent analyses of temperature during a second three-day period in January 2009 remain in progress.
Shocked Electrons: Determination of the Heating Mechanism in Abell 665
Wik, Daniel (University of Utah)
Faculty Advisor: Wik, Daniel (Science, Physics and Astronomy)
Mergers between galaxy clusters are some of the most energetic events in the universe, driving shock fronts in the intracluster medium (ICM), an X-ray hot plasma permeating the cluster. Shock fronts heat thermal electrons, causing an increase in their temperature. The mechanism by which this occurs is undetermined, with two models being proposed to explain the phenomenon. The first proposes direct shock-heating and the second suggests indirect adiabatic compression, with the electrons subsequently equilibrating with ions heated by the shock. We utilize NuSTAR observations, advantaging its effective area at higher energies, of a shock in the merging cluster Abell 665 in order to discriminate between the models. To do so, a temperature profile was constructed across the shock, utilizing spectral fitting, and compared against the models' predictions. In addition, temperature maps across the cluster were generated to better understand the merger event as a whole. We find that the temperature profile is suggestive of the shock model but is not yet statistically significant, due to NuSTAR's comparatively worse spatial resolution. As a result, we apply a novel joint fitting technique to NuSTAR data and Chandra observations in order to statistically distinguish between the models for the first time, accounting for the scattering of photons due to the PSF. Understanding these processes increases our understanding of the magnetic field of the ICM, allowing for mass determination, permitting galaxy clusters to be used to constrain cosmological studies.
Faculty Advisor: Wik, Daniel (Science, Physics and Astronomy)
Mergers between galaxy clusters are some of the most energetic events in the universe, driving shock fronts in the intracluster medium (ICM), an X-ray hot plasma permeating the cluster. Shock fronts heat thermal electrons, causing an increase in their temperature. The mechanism by which this occurs is undetermined, with two models being proposed to explain the phenomenon. The first proposes direct shock-heating and the second suggests indirect adiabatic compression, with the electrons subsequently equilibrating with ions heated by the shock. We utilize NuSTAR observations, advantaging its effective area at higher energies, of a shock in the merging cluster Abell 665 in order to discriminate between the models. To do so, a temperature profile was constructed across the shock, utilizing spectral fitting, and compared against the models' predictions. In addition, temperature maps across the cluster were generated to better understand the merger event as a whole. We find that the temperature profile is suggestive of the shock model but is not yet statistically significant, due to NuSTAR's comparatively worse spatial resolution. As a result, we apply a novel joint fitting technique to NuSTAR data and Chandra observations in order to statistically distinguish between the models for the first time, accounting for the scattering of photons due to the PSF. Understanding these processes increases our understanding of the magnetic field of the ICM, allowing for mass determination, permitting galaxy clusters to be used to constrain cosmological studies.