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Fine Arts

Subconscious Comprehension of Structural Forms: An Eye-Tracking Study

March 21, 2024 12:00 AM
Authors: Jared K Bradshaw. Mentors: Brandon Ro. Insitution: Utah Valley University. This research seeks to analyze if there exists an understanding of structural design principles among untrained humans. Building forms and styles have evolved since the earliest structures. For thousands of years buildings were limited by naturally occurring materials. Designs of those periods reflected the structural principles of those materials. In the last few hundred years technological advances have provided structural methods which radically altered how buildings can be designed. An example is the difference in column spacing between historic and modern buildings, where the former has much tighter spacing due to natural material’s spanning limitations. To analyze the understanding of untrained humans an eye-tracking study was conducted using A.I.-3M-VAS eye-tracking software. This technology utilizes artificial intelligence to graphically display eye gaze sequences, patterns, and durations of focus. The software reflects the first few seconds of eye-tracking, providing insights into subconscious reactions before a logical response is formed. Images of structural elements were designed digitally to reflect a variety of forms, maintain cohesiveness, and remove visual variables. Each image was individually processed through the software providing isolated results. The results of the study show consistent patterns of focus on locations of structural significance, such as bearing points, connections, and material loads. The consistency by which these concepts received focus concludes that there is an innate human ability to locate structural methods of building. Of note the structural forms which adhered to the limits of natural materials registered different eye tracking patterns than the modern manipulated material forms. The historic methods displayed even tracking throughout the structure, whereas the modern methods created hot spots at the points of greatest structural significance. The differences further emphasizes that untrained people are not limited to just understanding familiar structural forms. This will allow for further research on the physiological effects between form types.

Fremont Red-on-Gray Pottery

March 21, 2024 12:00 AM
Authors: Talia Berglund. Mentors: Michael T. Searcy. Insitution: Brigham Young University. Fremont Red-on-Gray Pottery Specific to the Northern Macro-Region of inhabitance, there has yet to be a comprehensive cataloging of Fremont red-on-gray ceramics. As such, I will be asking the following research questions in regard to this type of ceramic: What designs were painted on Great Salt Lake red-on-gray? And how do these designs compare to other Fremont ceramic types? In order to effectively answer these questions, I will look at Great Salt Lake Fremont ceramic vessels and sherds with traces of red paint on the surface, with a particular emphasis on the artifacts found at Hinckley mounds but comparing them to Wolf Village specimens as well. The research will include recording the shapes and designs that are painted on the vessels, as well as measuring width and length of these lines and shapes. I will also investigate what the red pigment is made out of–using either PXRF or microscopic analysis. These methods will generate a catalog of designs found on red-on-gray ceramics, as well as a data set that will allow me to look for patterns among the painted designs. I plan to develop a general typology of red-on-gray Fremont pottery based on the sample investigated.In carrying out this research, we should be able to assess whether or not the Fremont in the Northern Macro-Region shared painting practices with other Fremont in different areas, and thus possibly determine how they viewed themselves as belonging to or different from other nearby groups of people. If a pattern emerges and red-on-gray designs are shared between groups, then perhaps they interacted with and associated with those groups. If there is a lack of shared practices and designs, the opposite could be potentially true.

Foreign Textiles at the Early Christian Fag el-Gamous Cemetery in Egypt

March 21, 2024 12:00 AM
Authors: Jenna Norris. Mentors: Kerry Muhlestein. Insitution: Brigham Young University. In the hot and dry climate of the Fag el-Gamous Cemetery in Egypt, a wide range of elaborately woven textiles have been preserved, each with unique characteristics and technical elements. Through analyzing technical elements, this research aims to reveal evidence of foreign textile production or materials incorporated in Fag el-Gamous burials. The BYU Egypt Excavation Team has been excavating at the cemetery for over 40 years, uncovering important information about the region’s ancient inhabitants. Due to their exceptional preservation, textiles can provide significant insights into the lives and identities of the individuals buried at the site. While studies have been conducted in the past to address how socioeconomic status and religious affiliation are reflected in textiles, more remains to be learned about how foreign connections and trade affected textile production in the Fayoum region. This research aims to utilize both technical and design analysis to identify foreign textiles—including analyzing weaving techniques, thread manipulations, and woven motifs. It will also aim to use these forms of analyses to detect potential indications of immigration, providing a foundation for future research into connections between immigrant status and funerary practices.

The effects of stinging nettle oil on the vascular smooth muscle in frogs

March 21, 2024 12:00 AM
Authors: Tia Dudley, Ty Erickson. Mentors: Matthew Weeg, Mary Jo Tufte. Insitution: Southern Utah University. The pharmacological investigation of plant essential oils has been expanding due to their suspected health implications. Research supports that plant essential oils have cardiovascular benefits, including reducing blood pressure and managing hypertension. Our research centers on stinging nettle and its effect on the vasculature in frogs. Existing evidence shows that stinging nettle can be used to treat hypertension, a disease intensified by vasoconstriction. Our study aims to investigate if stinging nettle causes a relaxation in smooth muscle and vasodilation. We administered stinging nettle on the vasculature in frogs and measured the diameter of the blood vessels before, during, and after the application. Results show that the application of stinging nettle has a vasodilating effect on some of the smaller blood vessels. The vasodilation is a potential mechanism for the anti-hypertensive effects of stinging nettle. These findings illustrate a probable avenue in cardiovascular medicine and highlight the potential of plant oils in reshaping the landscape of modern health.

The Transmission of National Identity: A Case Study of Japan's Memorialization of the Past

March 21, 2024 12:00 AM
Authors: Ashlyn Clark. Mentors: Lynnette Finau. Insitution: Brigham Young University. Festivals, museums, bookstores, and Shinto shrines might not seem to have a lot in common, but implicit Nationalist ideals find their way into each of these, leaving their mark in the transmission of Japanese identity. In this study of Yasukuni Jinja and the Yushukan Museum (the Tokyo National War and Peace Memorial shrine and museum), it becomes more clear how these relate to one another, how they relate to Japanese identity, and how exactly they are nationalist in nature. Honor, sacrifice, tradition, and war come together to create a beautiful, unifying narrative that links ancestors with descendants, maintaining national identity and continuing to transmit their traditional ideals.

‘I Want to Destroy Public Education’: A Critical Case Study of School Choice in Utah

March 21, 2024 12:00 AM
Authors: Ann Day, Shawn Coon. Mentors: Shawn Coon. Insitution: Westminster College. The decades long movement to discredit, defund, and de-professionalize public education has taken many forms. Since the COVID-19 pandemic, policymakers have increasingly attempted to undermine public education through state specific programs (Bacher-Hicks et tal., 2023; Peele & Riser-Kositsky, 2020; Friedman & Young, 2022; Perera, 2023; Vasallo, 2023; Walker, 2022). These policies have taken many forms and attempted to address multiple perceived problems. However, the one commonality between all of these policies is that they perpetuate a trend of educational policymaking that tacitly or actively attempts to de-professionalize teachers and teaching (Apple, 2004; Milner, 2013). The state of Utah, and it’s 2023 legislative session, offers a compelling case study into why this legislation continues to emerge, the rationale behind this movement, and the impact these policies have on educators.

Income Inequality for Women in the Psychology Field

March 21, 2024 12:00 AM
Authors: Jacob Willoughby. Mentors: Joshua Price. Insitution: Southern Utah University. Gender pay inequality remains a persistent and widely discussed issue across various professions and industries. I was curious about the extent that this issue affects the field of psychology as it is an industry that is quite significantly dominated by woman. This econometrics paper delves into the complex landscape of possible gender-based wage disparities within the realm of psychology. By employing rigorous statistical analysis and econometric techniques, I aim to uncover the underlying factors contributing to the pay gap between male and female psychologists. Understanding the intricacies of this phenomenon is not only essential for promoting fairness and equality in the workplace but also for fostering a more inclusive and diverse community within the field of psychology. This study endeavors to shed light on the extent of the pay gap, its determinants, and potential policy implications to address this critical issue in the profession.

A Place for the Arts: Creating Spaces for Cross-Community Contact in Belfast

March 21, 2024 12:00 AM
Authors: Addie Ressler. Mentors: Jacob R. Hickman. Insitution: Brigham Young University. Since the conflict named “the Troubles”, infrastructure and symbolic imagery have been used to divide areas within Northern Ireland and mark territory between Loyalist and Republican communities. While the larger community in Belfast is still held by these physically and socially enforced boundaries, the art community actively defies these restrictive borders by renting, renovating, and then transforming buildings and spaces within segregated areas. In this paper, I analyze the unique and incomparable role that artists can play in pushing against the sectarian attitudes that persist within Belfast. Their success is dependent, in part, on the spaces they occupy and the use of those spaces. I argue that because artists infuse their studios and buildings with metaphysical meaning, artist collectives are able to provide neutral spaces where individuals from the opposing communities can come in contact with one another. Ultimately, members of the art community in Belfast strive to produce a commune-like entity that can act as a microcosm for an ideal Belfast.

What brings us together: how global identity is influenced by images of success or suffering

March 21, 2024 12:00 AM
Authors: Jaiden Sherratt, Madison Ward, Alexandra Clements, Makenzie Vance, Christopher Furlow. Mentors: Julie Johnson Pynn. Insitution: Southern Utah University. Global identity is a concept once recognized by Maslow in 1954 as he said people “feel a kinship and connection, as if all people were members of a single family… Because of this, self-actualizing people have a genuine desire to help the human race.” Historically, it has been seen that this sense of global identity and citizenship can lead to great acts of kindness and empathy, as was the case with Chiune Sugihara who saved over 6000 Jews from Nazi oppression out of a sense of love for humanity (McFarland et al., 2013). It was also found that people with a strong global identity are more likely to be concerned about human rights and hold egalitarian views (McFarland et al., 2012). The research sought to answer the question, “Can images of global success or suffering affect subjects’ feeling of connection with humanity as a whole?” Through this research, we can better understand how positive or negative events impact people’s feelings of global citizenship. Participants will be recruited through the SONA system, as well as the researchers’ social media accounts, and a SUU portal announcement. Our main survey measure is the Identification With All Humanity scale. The scale is intended to measure an individual’s characteristics of concern for global issues and human rights, prosocial attitudes, intergroup forgiveness, and solving global problems (Hamer 2021). Participants were randomly assigned to one of two exposure conditions consisting of either 10 images of human success or 10 images of human suffering. Participants took the adapted IWAH survey, then were exposed to one of the two image sets for five second minimum per image, then took the adapted IWAH survey again to see if the images influenced their perception of global identity. After exposure, participants were asked “Did these images affect your feeling of connection with humanity? Why or why not? The images presented focused on issues of environmentalism. This research is currently in the phase of conducting the survey, and will close the survey gathering on November 1, 2023. Then the researchers will analyze the collected data to see if images of success or suffering influence global identity.

Conserving a keystone predator in the Americas: integrating phylogenomics, biogeography, and species-level taxonomy for a widespread army ant genus

March 21, 2024 12:00 AM
Authors: Megan DuVal, John Longino, Rodolfo da Silva Probst. Mentors: John Longino. Insitution: University of Utah. Army ants (Formicidae: Dorylinae) are top predators throughout most tropical and subtropical regions of the world. Their nomadic colonies and cooperative social hunting make them behaviorally and ecologically unique keystone species that are of conservation concern. Their status as nomadic top predators makes army ants vulnerable in areas affected by habitat fragmentation. An obstacle to conservation efforts is the outdated army ant species-level taxonomy, which hasn’t been updated since the 1950s for many genera. For Labidus, a widespread and ecologically important army ant genus in the Americas, there are currently seven valid species recognized solely based on morphology of workers and/or males. Three species are only based on males, which need to be associated with their respective workers, and within the four primarily worker-based species, there are likely cryptic species. To address these issues, we applied cutting-edge phylogenetics and phylogenomics to update the species-level taxonomy. To construct our phylogenetic tree, we used ultraconserved elements (UCEs, which use thousands of regions across the genome and can accurately infer evolutionary relationships across broad timescales) from 17 specimens, 66 COI barcodes from the Barcode of Life Database (BOLD), and 35 new COI barcodes obtained through in-house Nanopore sequencing. Through our analyses, we found that the genus Labidus contains at least 11 species and that all of the previously recognized wide-ranging species are made up of multiple cryptic species with more restricted ranges. We were able to associate all three previously identified male-based species with their respective workers. We have also found patterns of parallel and overlapping biogeography across multiple Labidus clades. Our UCE+Nanopore approach allows for an updated taxonomy of Labidus, leading to a better understanding of its evolutionary history and a better ability to promote its conservation.

Understanding the Effect of Printing Parameters and Prewetting on Binder Jetting Continuous Line Formation

March 21, 2024 12:00 AM
Authors: A. Kalani Brubaker. Mentors: Nathan Crane. Insitution: Brigham Young University. Binder Jetting is an exciting form of Additive Manufacturing in which a binding agent is selectively deposited on layers of powder to bind the powder together and create a 3D printed part. It is notable for its wide range of materials, energy efficiency, and built-in supports. Much research has been done on how to achieve desirable properties of binder-jetted parts and post-processing, but the fundamental principles of binder-powder interaction and the effects of changing printing parameters are still not fully understood. This research aims to increase that understanding. Each binder-jetted part begins by depositing individual binder droplets in a straight line, and the binder-powder droplets coalesce to form a single line. Adjacent lines are then printed to form a cross-section of the part, the next layer of powder is applied, and the process continues until a 3D part is printed. If the spacing between the droplets is too large or the inter-arrival time too short, the droplets form spheres on the surface of the powder (a phenomenon called balling), and a continuous line is not formed. This research determines how continuous line formation is affected by droplet spacing, inter-arrival time, and controlled misting of the powder bed prior to printing. To examine the effects of these parameters, lines were printed in dry and prewetted powder beds while varying the spacing and inter-arrival time between droplets. The beds were then examined using an optical microscope to determine whether continuous lines were formed. The results were recorded on a graph of inter-arrival time versus droplet spacing, and the “boundary line” for successful line formation was found for each bed. The results showed that the boundary on the prewetted data exhibited a different relationship than dry powder beds, suggesting that a different binder-powder principle may dominate after prewetting. The prewetting also shifted the boundary upwards, making it possible to form continuous lines at higher droplet spacings and shorter inter-arrival times. This increased ability to form continuous lines has the potential to significantly increase the throughput of binder-jetted parts.

Bloom's and SOLO: A Comparison of Educational Taxonomies

March 21, 2024 12:00 AM
Authors: Spenser A Clark. Mentors: Acacia Overono. Insitution: Utah Valley University. It is not uncommon for a college student to see a list of learning objectives when skimming through a syllabus for a program or course. The goal of learning objectives is to set reasonable expectations for student learning and guide their study, as well as providing a framework for the development of teaching practices and assessment. Part of the inception of learning objectives as a means of organizing teaching and assessment in the classroom may be attributable to the Taxonomy of Educational Objectives, more commonly referred to as Bloom's Taxonomy. Another taxonomy similar to Bloom's, but much less well known, is the Structure of Observed Learning Outcome (SOLO) taxonomy. Bloom’s taxonomy organizes learning objectives into six categories: Remember, Understand, Apply, Analyze, Evaluate, and Create. The categories are structured as a cumulative hierarchy in which mastery of each level is assumed necessary for progressing to the next. The structure of Bloom’s is not derived from any specific learning theory, but a categorization of pre-existing learning objectives. Bloom’s therefore suffers from a lack of a strong theoretical foundation and may not accurately reflect how learning actually occurs. Additionally, although Bloom’s has been widely employed in the context of educational assessment, research has shown that it suffers from low interrater reliability and is inconsistent between educational contexts such as courses and topics. Unlike Bloom’s, SOLO is based upon Piaget’s Stage Development theory and categorizes learning into five distinct stages: Prestructural, Unistructural, Multistructrual, Relational, and Extended Abstract. SOLO does not suggest that learning is unidirectional or hierarchical. It also acknowledges internal cognitive processes rather than focusing solely on observable behaviors. Although very little research has investigated its reliability, it could be an attractive alternative to Bloom’s because it may more accurately reflect how learning occurs. The present work reviews the development and implementation of these two models and compares them.

Bacterial Separation by poly-Dopamine Coated Magnetic Nanoparticles

March 21, 2024 12:00 AM
Authors: Camille Bryner, Alyson Camacho, Bowen J Houser. Mentors: William G Pitt. Insitution: Brigham Young University. In an attempt to combat a growing number of nosocomial infections related to medical devices, many studies have investigated the effect of polydopamine (pDA) coated surfaces on biofilm formation and found them to have antibacterial and anti-adhesive properties. However, we discovered that pDA coated magnetic nanoparticles (MNPs) display strong attractive interactions with many, but not all, species of bacteria. Fe3O4 MNPs were prepared using sodium acetate, ethylene glycol, and iron (III) chloride hexahydrate solutions and characterized by a variety of methods. XRD data confirmed a magnetite pattern characteristic of Fe3O4, then TEM characterization of MNP samples showed successful pDA coating onto iron oxide particles. Bacterial capture efficiencies (CE) by pDA-MNPs for 8 strains of bacteria were measured by optical turbidity and plate counts. We have found that CE is a function of exposure time to and concentration of MNPS; thus some experiments were done with constant exposure time and variable MNP concentration and others were done at variable exposure times and constant MNP concentrations. Additionally, these pDA-MNPs exhibit extremely efficient adhesion to some bacteria such as Staphylococcus epidermidis (S. epidermidis) while being ineffective at capturing some strains of Esherichia coli (E. coli). We propose that such capture ability of pDA-coated MNPs can be employed for detection and identification of bacteria in hospitals and for food science quality control.

Chronic obstructive pulmonary disorder remote patient monitoring using spirometry: a systematic review

March 21, 2024 12:00 AM
Authors: Joseph Nielson, Ben Schooley. Mentors: Ben Schooley. Insitution: Brigham Young University. Chronic obstructive pulmonary disorder (COPD) affects an estimated 30 million Americans and is the third leading cause of death worldwide. A recent effort to curb deaths and hospitalizations involves remote patient monitoring (RPM). Of all possible monitoring parameters, spirometry presents itself as potentially accurate and helpful, but the exact effect and its size remain to be described. A systematic literature review is being performed to describe the current state and future opportunities in RPM systems that use remote spirometry for COPD patients. Only studies that specifically mention the use remote spirometry for monitoring COPD patients were included. The databases PubMed, Web of Science, Scopus, and EBSCO were searched in July and August 2023. Studies are being synthesized by tabulating the study sizes and designs, technological parameters, and interesting findings. Twenty-nine studies have been included spanning feasibility and pilot studies as well as one randomized clinical trial. Remote spirometry for COPD patients has generally been shown to be feasible. Many studies present systems in early stages of development that have yet to be tested thoroughly in large trials. It may be necessary to involve remote spirometry in more large-scale trials soon. Future studies could confirm the degree to which spirometry adds helpful information for monitoring COPD patients.

Constant pressure untethered soft robotics: an adaptable solution to the limitations of soft robots

March 21, 2024 12:00 AM
Authors: James Wade, Chris Paul. Mentors: Nathan Usevitch. Insitution: Brigham Young University. Soft Robotics offer significant advantages when completing certain tasks compared to other robots and methods. Compliance, adaptability, and energy efficiency are a few of the major advantages. On the moon, where safety, volume and versatility are of high importance, soft robotics may find an innovative niche. NASA’s BIG Idea Challenge for 2024 incentivizes creating new innovative soft robot designs. Our research group is building our facility mentor, Nathan Usevitch’s, work at Stanford University. Doctor Usevitch and his cohort developed an octahedral, inflated robot composed of multiple tubes folded into triangular shapes in a truss-like structure. Each triangle consisted of a long inflatable tube and 3 motorized modules at the nodes of the triangle. The motorized nodes (consisting of a DC motor and rollers) roll along the length of the tube, lengthening one edge of the triangle while shortening the other. By attaching multiple triangles to each other in geometric shapes, flexible structures are created that can adapt their shape to the desired need. Because this system has a constant inflated volume, no external air compressor is necessary, allowing for untethered movement. The bulk of the mechanical work is performed by electric motors, providing a higher energy efficiency than a system of repeated inflation. Furthermore, this design is compactly stored when deflated, optimal for transport into space.To build on this design and optimize it for use on the moon, our research group will make the following changes and improvements:- Developing the physical prototype. This will enable robust and dynamic movement and the support of large loads- Develop a simulation tool that allows us to explore different configurations of the robot for different tasks- Develop a joint system that allows an astronaut to quickly reconfigure the triangles into different structures based on the required task - Develop a control approach that accounts for the underdamped dynamics of large inflatable structuresThrough our research, we hope to expand the possibilities of soft robotics. We are synthesizing the advantages of traditional robotics (robustness, untethered motion) with the unique strengths of soft robotics (flexibility, adaptability, cost efficiency).

An Analysis of the Neuroscience of Love and the Physiological Similarities it Holds to Addiction

March 21, 2024 12:00 AM
Authors: Audrey Wells. Mentors: Fredric Govedich. Insitution: Southern Utah University. This project is an interdisciplinary meta-analysis of literature across neuroscience, psychology, biochemistry, and biological anthropology. I am interested in comparing the neural physiology of love relationships to that of recreational drug use. I have cross referenced studies on the areas of activation and neurotransmitter level changes for each of these experiences. Both of these activities, specifically when comparing drugs to the infatuation stage of a relationship, show a dramatic increase in the reward complex within the center of the human brain, as well as an increase in risky behavior and obsession with the object of attraction/addiction. I then continued in an analysis of the termination from either positive stimuli, namely, rejection from a lover, and recreational drug withdrawal. I have found that within the motivational sectors of the brain, activation when viewing your rejector, as well as the heightened dopamine produced, show comparable similarities to those who are experiencing an active physiology drug withdrawal.

Pandemic Effects on the Work From Home Market

March 21, 2024 12:00 AM
Authors: Eve Christensen, Chase Redd, Bailey Uzzardo. Mentors: Elijah Neilson. Insitution: Southern Utah University. The advent of the Covid-19 pandemic in early 2020 brought with it a host of changes to the workplace. One change in particular was the wide-spread transition to remote work as opposed to in-person work as concerns with spreading the Covid-19 virus necessitated a shift in how the labor force performed their work. The Covid-19 pandemic created more opportunities for employees to work from home rather than working on site. This paper seeks to evaluate the correlation between working from home and earnings using an econometric model. By comparing an individual’s earnings before and after the Covid-19 pandemic, along with whether they work from home or on site, we hope to better understand the effect that remote work has on a person's decision to enter the job market and which fields the incoming labor force are pursuing. Our findings will also be relevant to employers as they evaluate what a competitive wage would be depending on the availability of work from home options for a certain job.

Photographic Depictions of Polygamy from 1878-1953

March 21, 2024 12:00 AM
Authors: Holly Biesinger. Mentors: Ran Qi. Insitution: Southern Utah University. This study analyzes important intersections in the relationship that photography had with polygamy from the year 1878, when the gelatin dry-plate method of photography became commercialized, to 1953, when the Short Creek Raids occurred. The study focuses on the polygamist faction within the Mormon Church (The Church of Jesus Christ of Latter-Day Saints), specifically the group that later evolved into the Fundamentalist Latter-Day Saints (FLDS). It is important to note that not all members of the original Mormon church were polygamists, and as such this study does not represent the church as a whole. Additionally, it is important to note that the entire history of polygamy or photography will not be addressed, but key points of intersection will be acknowledged. This study describes how photography that contained polygamist subjects shifted over time and established a narrative for the outside general public to understand.

Group Theory for Procedural Content Generation: Towards Generating Objects from Mathematical Description

March 21, 2024 12:00 AM
Authors: Jonas P Knochelmann. Mentors: Rogelio E. Cardona-Rivera. Insitution: University of Utah. Despite the highly technical nature of Procedural Content Generation (PCG), the holistic study of the discipline is minimal and qualitative. We argue that this gap exists because there is no formal framework to talk about PCG artifacts and algorithms and propose the mathematical field of group theory to serve as such a framework. Group theory is a well-established discipline that has been embraced in chemistry, physics, and art, with tools for analyzing, combining, and generating objects based on their structure. We outline a specific method for applying group theory to PCG and explore a number of case studies in the hopes of developing a more unified formal framework for future study.

Pollen DNA Metabarcoding to Analyze the Effect of Formic Acid Treatment on Foraging Behaviors of Apis mellifera

March 21, 2024 12:00 AM
Authors: Claudia Wiese, Josh Steffen, Heather Briggs, Rodolfo Probst. Mentors: Josh Steffen. Insitution: University of Utah. Evaluating effect of formic acid treatment on foraging behaviors of Apis mellifera through pollen DNA metabarcoding using the MinION deviceBees play a vital role in maintaining the health and productivity of terrestrial ecosystems by providing pollination to many of the world’s plants. In recent decades, many bee species, including Apis mellifera (European honeybee), have experienced worldwide population declines.Varroa destructor, an external parasite, is one of the leading causes of honeybee population declines, as they are the primary cause of colony collapse disorder.Various methods exist to control the impact of V. destructor, including Formic Acid (FA) treatment, a well-documented solution to reducing V. destructor numbers. Yet, despite clearly established evidence that A. mellifera behaviors are very sensitive to changes in their hive environment, very few studies have looked at the effect of FA on honeybee foraging behavior. DNA metabarcoding is a powerful tool allowing ecologists to quantitatively assess differences in diet within species without the need for extensive knowledge of pollen taxonomy or complicated fieldwork experiments.In this study, A. mellifera hives (n=7) were split into control (n=3) and treatment groups (n=4). Pollen samples were collected from all hives before, during, and after FA treatment to compare if FA application impacted the foraging patterns of the bees in the treated colonies as compared to the control group. To compare foraging patterns between the treatments, we performed metabarcoding using the trnL (UAA) chloroplast intronic region, commonly used to barcode plant species. Amplicons were subsequently sequenced with a portable sequencer (ONT MinION Mk1C). Basecalling, quality check, demultiplexing, and filtering of the data were conducted with Guppy and Medaka. Obtained sequences (n=120 reads) were compared to a reference database with BLAST to determine the sequence identity of visited plants. With this information, we plan to compare absolute foraging numbers, species, and related ratios between control and experimental hives. Most sequences were assigned with a high percentage identity to a sample database (>89%), Although certain species (e.g., Malus sylvestris [European crab apple] and Prunus avium [wild cherry]) were probably visited by all hives, our preliminary findings show that pollen loads differ between control and experimental conditions, indicating a variation in floral visitation.These results suggest that FA treatment, while effective at controlling V. destructor, may impact honeybee foraging patterns. Further research is needed to understand if this behavioral change is detrimental to the health of the colony, and the consequences of variation in floral visitation to pollination networks.

Preferential Capture of Bacteria Using pDA-coated Magnetic Nanoparticles

March 21, 2024 12:00 AM
Authors: Alyson Camacho, Camille Bryner, Bowen Houser. Mentors: William Pitt. Insitution: Brigham Young University. Current methods for the diagnosis of bacterial infections require time consuming cultures. To prevent deaths caused by sepsis, faster methods for bacterial identification and antibiotic susceptibility methods are urgently needed. Necessary to these faster methods is the ability to separate and concentrate bacteria. While techniques such as filtering and centrifugation have been explored for this purpose, we propose an innovative approach. Polydopamine (pDA) is a remarkably adhesive polymer that has been used to create antibacterial and anti-biofouling coatings on medical devices. In this study, however, we show how magnetic nanoparticles (MNPs) coated with pDA can selectively bind and remove specific bacteria from suspensions. For these experiments, pDA- MNPs were added to suspensions of bacteria mixtures and allowed to bind for 10 minutes. The MNP/bacteria mixture was then placed on a holder with a magnet which collected the MNPs on the side of the test tube. Finally, the bacterial supernatant was carefully removed and plated. Capture efficiency of the beads was calculated and it was shown that the pDA-coated MNPs preferentially isolated S. epidermidis from a suspension of both S. epidermidis and E. coli. This approach holds great potential for separating bacteria from clinical samples like urine or blood, enabling faster and more efficient diagnosis of bacterial infections.

Meta-Analysis Of 58 Human RNA-seq Datasets To Predict Mechanisms and Markers for Resistance in ER+ Breast Cancer Treated with Letrozole (an aromatase inhibitor)

March 21, 2024 12:00 AM
Authors: Brett Pickett, Lincoln Sutherland, Jacob Lang. Mentors: Brett Pickett. Insitution: Brigham Young University. Introduction: Breast cancer is one of the most prevalent types of cancer present in society today, and is the second leading cause of cancer death for women. Approximately 13% (1 in 8) of women will develop invasive breast cancer, with 3% of women (1 in 39) dying from this type of cancer. Three important classifications used when formulating a treatment plan for breast cancer are the presence or absence of Estrogen Receptor (ER), Progesterone Receptor (PR), or Hormone Receptor (HR). Treating Estrogen Receptor Positive (ER+) breast cancer with aromatase inhibitors, such as Letrozole, is the current standard treatment for all postmenopausal women. A prior study by Lee et. al. identified PRR11 as the only gene that was significantly overexpressed in resistant vs non-resistant cancers among the 51 genes in chromosome arm 17q23. The goal of the current study is to perform a secondary analysis of this valuable dataset to identify genes, signaling pathways, and biomarkers across the whole human transcriptome that are significantly associated with treatment resistance in ER+ patients.Methods: We retrieved, preprocessed and analyzed 58 ER+ breast cancer samples from patients who had been treated with Letrozole, which are publicly available in the NCBI Gene Expression Omnibus (GEO) database. The Automated Reproducible MOdular Workflow for Preprocessing and Differential Analysis of RNA-seq Data (ARMOR) was used to process our data downloaded from NCBI. This workflow trimmed low quality reads from the RNA-sequence reads, mapped and quantified our data to generate a DEG list. Gene ontology enrichment with camera was also performed. Next, the genes were mapped to common gene identifiers and input to the signaling pathway impact analysis (SPIA) algorithm to identify intracellular signaling pathways that were enhanced by our DEGs. With that information, Pathway2Target was used to identify known drug targets within our identified pathways. Finally, a decision tree-based machine learning approach was used to predict features/expressed genes that could be used to most accurately classify responders vs nonresponders to Letrozole. Results: Our comparison of 36 responders versus 22 non-responders detected a total of 18,735 genes and identified 105 that were statistically significant (p-value < 0.05) after applying a false-discovery rate (FDR) correction, including SOX11, S100A8/S100A8, and IGLV3-25. We then used the Signaling Pathway Impact Analysis (SPIA) algorithm to determine whether any known intracellular signaling pathways were significantly enriched in DEGs (Bonferroni-adjusted p-value < 0.05). This analysis identified 4 pathways that were statistically significant in Non-Responders to Letrozole Treatment. We then used the pathway results to predict 60 existing therapeutic targets that could be repurposed to treat the resistance phenotype. Notably, the predicted targets for the non-response phenotype included VEGFA, a current target for solid tumors as well as ESR1, an Estrogen Receptor. We next wanted to determine whether we could predict transcriptional biomarkers that could aid with identifying patients that do not respond to treatment. To do so, we used the read counts for all samples as the input for this analysis and identified 278 transcriptional biomarkers. Performance metrics for all biomarkers identified yielded an area under the receiver-operator characteristic (AUROC) curve of 0.972 (Figure 2), indicating an exceptional ability to classify Letrozole responders vs non-responders by the transcriptional profile. Sensitivity for all transcriptional biomarkers was measured at 100%, and specificity at 94%. We used the top two biomarkers from our first analysis as input for a second analysis to determine the performance of a smaller subset. Our second analysis determined that PRDX4 and E2F8 together yielded an AUROC of 0.823 and an overall accuracy of 88.2%. Discussion:Our results identify additional DEGs, pathways, targets and biomarkers for further exploration in the treatment and categorization of ER+ breast cancer.

Salt-Water Acclimation in Atlantic Salmon sheds light on claudin shifting and tight junction membrane proteins composition

March 21, 2024 12:00 AM
Authors: Joshua Hutchins, Kevin Wong. Mentors: Dario Mizrachi. Insitution: Brigham Young University. Tight junctions (TJ’s) are composed of mainly three types of cell-adhesion molecules (CAMs) that regulate paracellular permeability in epithelial and endothelial cells. These are claudins (CLDNs), occludin (OCLN), and junctional adhesion molecules (JAMs).There are, however, several (27) isoforms of the claudin molecule, all of which are suspected to have different strengths and other properties in cell adhesion. Currently, the comparative strength of the interactions between different CAMs are unknown and no easily replicable model of a TJ has been created. To address this question we resourced to bacterial expression of these mammalian proteins. MG1655 E. coli cells (with flagellum) were transformed to express claudins 1, 2, 3, 5, and 10 as well as occludin and plated on 0.2% agar plates, allowing them to swim overnight. This allowed for a qualitative spectrum of strengths of the CAMs based on how far the cells were able to spread throughout the plate. Cells that interacted strongly swam less. This technique was applied to the case of the Atlantic Salmon. It swims both in fresh and ocean water. As it transitions, the TJs in its skin changes its composition of claudins. We were able to determine that the set of claudins employed during ocean water swimming are capable of stronger strength. This is consistent with the changes in osmolarity dictated by the amount of solute in the ocean water.

Exploring the bioactivity of flavonoid metabolites on beta cell function under GLT conditions

March 21, 2024 12:00 AM
Authors: Eden Beazer, Aubree Bench, Ethan Jones, Jared Carter. Mentors: Jeffrey Tessem. Insitution: Brigham Young University. Incidence of diabetes worldwide has grown from 108 million people in 1980 to 422 million people in 2014, nearly tripling in just thirty-four years. Type 2 diabetes (T2D) is characterized by the loss of pancreatic beta cell mass and the failure of the remaining beta cells to provide adequate insulin. Contributing to the development of T2D is glucolipotoxicity (GLT), a condition characterized by the harmful elevation of glucose and fatty acid levels within beta cells. While there are existing treatments for symptoms of diabetes, much remains to be understood about its underlying causes and effective preventative measures. Flavonoids are naturally occurring phenolic compounds found in many fruits and vegetables that have various anti-inflammatory health benefits. Previous studies suggest that epicatechin, a flavonoid present in cocoa, can reduce the effects of diabetes by diminishing insulin desensitization and increasing glucose stimulated insulin secretion (GSIS). Interestingly, the bioavailability of epicatechin is poor, while its metabolites are more easily absorbed in the small intestine. Further studies demonstrated that under non-stressed conditions in beta-cells, hippuric acid, homovanillic acid, and 5-phenylvaleric acid, metabolites of epicatechin, stimulate insulin secretion at concentrations more realistically found in the body. However, the effects of these metabolites in glucolipotoxic conditions are unknown. Here, we present the effects of epicatechin and its metabolites hippuric acid, homovanillic acid, and 5-phenylvaleric acid on beta cell insulin secretion and mitochondrial respiration under GLT culture conditions. This study aimed to contribute to the limited body of knowledge on the bioactivity of flavonoid metabolites on beta cell function under damaging conditions observed with T2D, offering crucial insights for developing effective strategies to harness the health benefits associated with flavonoids.

Prescribing Passion: How Medical Experiences Shape STEM Enthusiasm

March 21, 2024 12:00 AM
Authors: Porter Bischoff, Kody Garrett, Clayton Rawson. Mentors: Britt Wyatt, Josh Premo. Insitution: Utah Valley University. This research delves into the underexplored territory of medical experiences and their potential impact on undergraduate students' motivation in STEM courses. While prior studies have focused on factors like gender and ethnicity in STEM, little attention has been given to the influence of medical experiences and chronic conditions on STEM students, despite evidence suggesting that students with medical conditions face unique challenges in completing their degrees.Our study specifically investigates the effects of medical experiences and chronic conditions on students enrolled in science classes at an open enrollment institution. We hypothesize that increased academic interruptions due to medical experiences may lead to decreased science motivation, reduced sense of belonging, self-efficacy, and self-determination.Data was collected from 390 students across 14 biology courses, including non-majors, at a teaching-focused institution, both before and after the courses. Surprisingly, 57% of surveyed students reported having a medical experience, and 22% reported having a chronic condition, highlighting the significance of this identity within the student population.As anticipated, students experiencing more medical interruptions exhibited a notable decrease in their sense of belonging and self-efficacy, albeit with a small effect size. Intriguingly, students with medical experiences who engaged more with science demonstrated significantly higher levels of science immersion and motivation. This suggests that medical experiences can influence student engagement with science, both positively and negatively. The impact of these interruptions on a student's academics is closely linked to their sense of belonging and self-efficacy. However, if medical experiences drive increased engagement with science, students may find themselves more motivated to explore these experiences within the context of scientific inquiry.Understanding how medical experiences can shape students' motivation is essential as science instructors adapt their course content and pedagogy to be more inclusive, embracing the diverse identities within their student population.

Neural Networks associated with Gait Apraxia

March 21, 2024 12:00 AM
Authors: Zach Fiore. Mentors: Jared Nielsen. Insitution: Brigham Young University. Gait apraxia is a type of apraxia that affects lower limb use in walking. It is characterized by difficulty initiating gait, freezing of gait, and other gait disturbances that cannot be attributed to complications affecting sensory, motor, or cerebellar function, psychiatric disease, nor ataxia. Symptoms often present following brain trauma. Previous research has indicated that gait apraxia may be linked to lesions in the frontal lobes, basal ganglia and supplementary motor area. However, the specific cerebral location has been debated with minimal research done on the symptom’s implicated neural circuits. The purpose of this study is to determine the networks in the brain that are involved in the pathophysiology of gait apraxia. To determine this, we used the lesion network mapping method. A systematic literature review was performed, with specific inclusion criteria, to find case studies of patients presenting with gait apraxia stemming from acquired brain injury (n=15). Lesion network mapping analysis (Fox et al., 2018) was performed on 15 cases with a large cohort of healthy control resting-state scans (n=1000). The analysis showed that lesions exhibited functional connectivity to the bilateral medial dorsal and pulvinar nuclei of the thalami (n=15), which supports previous associations of basal ganglia damage contributing to gait apraxia. A novel region, the cingulate cortex (n=15), was also found to be functionally connected to the lesion networks. This region is a part of the cingulo-opercular network, responsible for many functions, including action. This network has recently been found to display strong functional connectivity with the somato-cognitive action network, responsible for coordinating movements with cognitive processes. Further research is necessary to determine the mechanism of how these networks interact in contributing to gait apraxia.

The overexpression of Stx1A and its effects on glucose stimulated insulin secretion in pancreatic beta cells

March 21, 2024 12:00 AM
Authors: Jakob Lenker, Trevor Kendrick. Mentors: Jeff Tessem. Insitution: Brigham Young University. Diabetes is characterized by a loss in beta cell function within the pancreas and the subsequent inability to produce sufficient insulin to regulate blood glucose. While current diabetes treatments focus on delivering pharmaceutical insulin to diabetic individuals, such treatments are temporary solutions and do not address the root of the issue. Instead, our research focuses on potential mechanisms for inducing greater insulin secretion within the pancreas of the individual. NK6 Homeobox 1 (Nkx6.1) is a major transcription factor in beta cells and its overexpression in beta cells is associated with higher insulin secretion. We have shown that Syntaxin 1A (Stx1A) interacts with Nkx6.1; Stx1A is of particular interest due to its role in mediating insulin granule fusion at the beta cell plasma membrane, directly impacting insulin secretion. We hypothesize that the interaction between Nkx6.1 and Stx1A may play an important yet understudied role in insulin secretion. Here, we present the results of Stx1A overexpression on glucose-stimulated insulin secretion within pancreatic beta cells, as well as the effect on the Nkx6.1 interaction. Understanding more about the role of Stx1A in beta cells could provide therapeutic targets to induce greater insulin secretion, which could aid in the effort toward finding a cure to diabetes.

Effects of Methamphetamine on Microglia through Reactive Oxygen Species

March 21, 2024 12:00 AM
Authors: James Blood, Nathan Sheets, Chase Seiter, Lydia Hawley, Erin Taylor, Eliza White, Hillary Wadsworth, Jason Hansen, Jordan Yorgason. Mentors: Jordan Yorgason. Insitution: Brigham Young University. Microglia are the immune cells of the brain and are activated by many drugs of abuse. One drug of abuse of interest is methamphetamine, which is known to increase reactive oxygen species (ROS). Microglia are sensitive to ROS. Methamphetamine changes microglia morphology. To determine if the effects of methamphetamine on microglia are through ROS, glucose oxidase, which reacts with glucose to form hydrogen peroxide, was applied. Glucose oxidase increased ROS production and decreased dopamine release but had little-to-no effect on ATP release. Glucose oxidase has similar effects on microglia morphology compared to methamphetamine. This suggests that methamphetamine effects on microglia are due to ROS production. Methamphetamine locomotor sensitization behavioral experiments were run to mimic repeated methamphetamine exposure. Along with voltammetry experiments to measure dopamine and ATP release, methamphetamine treated animals were used to detect microglial morphology changes using confocal microscopy. Our methamphetamine treatment was able to change microglial morphology compared to saline treated controls. Methamphetamine injected animals also had attenuated glucose oxidase effects on dopamine release. By understanding how neuronal outputs affect microglia activity in the context of psychostimulant use we can better parse out how the mechanisms of addiction are connected to immune system function.

Analytical method development and quantification of chlorinated pesticides in Utah Lake

March 21, 2024 12:00 AM
Authors: Rob Patterson, Nate Graham. Mentors: Sally Rocks. Insitution: Utah Valley University. The pervasive use of pesticides in agricultural practices has raised environmental concerns due to their potential to contaminate water bodies and affect aquatic ecosystems. This study focuses on the identification and quantification of three common pesticides—atrazine, 2,4-dichlorophenoxyacetic acid (2,4-D), and dichlorodiphenyltrichloroethane (DDT) in Utah Lake.. Utilizing advanced chromatographic and spectroscopic techniques, including Gas Chromatography-Mass Spectrometry (GC-MS) and High-Performance Liquid Chromatography (HPLC), we aim to detect the presence and determine the concentration levels of these substances. Water samples were collected from multiple points around the lake to assess the spatial distribution of the pesticides. The method development involves optimization of sample preparation procedures, including solid-phase extraction (SPE) and cleanup, to increase the detection sensitivity and accuracy. This project enhances environmental monitoring and has implications for water quality management, regulatory compliance, and public health in the region. The anticipated results will contribute to a better understanding of pesticide pollution patterns and will aid in formulating strategies to mitigate the contamination of aquatic environments.

The Relationship Between Thiamine and Drosophila Melanogaster Preference for Dietary Yeast

March 21, 2024 12:00 AM
Authors: Dean Peterson. Mentors: John Chaston. Insitution: Brigham Young University. The microbiota of Drosophila melanogaster fruit flies can be observed to study their effects on fly phenotypes. This paper will focus on the microbiota’s effects on fruit fly dietary preference for yeast (DPY), to determine if specific nutritional molecules produced by the microbiota control DPY. Previous studies have unsuccessfully sought to identify such small molecules by testing for roles of essential amino acids (Leitao-Goncalves 2017). A study completed in our lab suggested that bacterial thiamine biosynthesis/metabolism genes influence fly DPY because mutations shifted the preference from a diet with less yeast to a diet with more yeast (Call 2022). In our first efforts we found that raising flies on thiamine supplemented diet influenced their DPY. I want to determine if supplementing thiamine specifically causes this shift, and if the shift observed in the mutants is seen due to a lack of dietary thiamine. Here, I will perform the same tests with flies given diet supplemented with other B vitamins to test specificity. I will then confirm the role of bacterial thiamine on these phenotypes by rearing flies colonized with bacterial thiamine biosynthesis/metabolism mutants on thiamine supplemented diets. If these flies raised with increased dietary thiamine prefer a diet with less yeast, and the experiment with other B vitamins does not show a similar shift as thiamine, then the specificity of thiamine as the small molecule involved in yeast preference is confirmed.

The effects of invasive competition on the phytochemistry of cottonwoods

March 21, 2024 12:00 AM
Authors: Jessica Crook, Brooke Parker, Michael C Rotter. Mentors: Michael C Rotter. Insitution: Utah Valley University. Fremont cottonwoods are a foundation species throughout the Wasatch front. Cottonwoods face a competitive threat from the invasive tamarisk, which grows very easily in the same habitats. Tamarisk can have a negative impact on cottonwoods, displacing them. The loss of cottonwoods could have negative impacts on ecosystems. This study will examine phytochemical compounds in cottonwoods, and how they are affected by growing in competition with tamarisk. We hypothesize that cottonwoods growing in competition with non-native tamarisk will be stressed and produce higher levels of phytochemical compounds. To test our hypothesis, cottonwoods were grown in pots from cuttings either in competition with a tamarisk cutting, or alone. We then tested total phenolics using a ferric chloride solution, and tannin content using a radial diffusion method. It’s predicted that due to the stress of competition, cottonwoods that grew with tamarisk will have higher overall phenolics and tannins than cottonwoods that were grown on their own. The results of this trial could be important in influencing beaver foraging patterns. Since beavers prefer trees with elevated levels of phenolics and other phytochemicals, this could imply an important mechanism allowing tamarisk to invade an area by stressing cottonwoods and encouraging beaver foraging on these plants.

Preliminary Studies Towards the Development of a Rapid, Point-of-Care Diagnostic Assay for the Detection of Mycobacterium tuberculosis

March 21, 2024 12:00 AM
Authors: Aubrey Russell, Ben Paepke, Nathan Goldfarb. Mentors: Nathan Goldfarb. Insitution: Utah Valley University. Tuberculosis (TB) remains an insidious scourge of civilization. The causative agent, Mycobacterium tuberculosis (Mtb), is a global health crisis, and TB ranks as the second leading cause of death from an infectious disease worldwide after COVID-19. In 2021, there were approximately 1.6 million deaths reported from TB (including 187,000 people with HIV) and an estimated 10.6 million new infections. Additionally, multidrug resistant TB remains a public health crisis. An initiative of “The Global Plan to End TB” is the development of rapid, point-of-care diagnostic assays for the early diagnosis of TB.2 Here we present our initial efforts towards the goal of the development of a rapid, lateral flow assay (LFA) for the detection of Mtb.

Arm Modeling in Preparation for Wearable Mobility-Enhancing Elbow Brace

March 21, 2024 12:00 AM
Authors: Samuel Stearman, Benjamin Crapo, Antonio Trujillo. Mentors: Jeff Hill. Insitution: Brigham Young University. Our goal at BYU SMASH IT lab is to improve patient’s mobility in rehabilitative settings. For this purpose, we’re modeling the human arm to aid in our design of wearable rehabilitative sleeves. We are investigating methods for manipulating elbow flexion and extension using an assistive elbow brace, such as through cable-driven movement and the less used concept of tensegrity. The appeal of these methods is their flexibility, lightweight, and multiple degrees of freedom in movement. In the prototyping stage we’ve created a test stand resembling a human arm that we use to evaluate how our elbow brace would interact with the wearer and measure the forces between the arm and the brace. Measurements from these tests will aid in our design of a future elbow brace. Knowledge gained from this work has the potential to apply to other joints, each with their own rehabilitative and other uses.

Determining the binding partners of orphan nuclear receptor Nr4a3 and their effect on proliferation and insulin secretion in the beta cells

March 21, 2024 12:00 AM
Authors: Owen Damitz. Mentors: Jeffrey Tessem. Insitution: Brigham Young University. Type one and two diabetes affect the everyday lives of millions of people worldwide. These diseases are characterized by decreased functional beta cell mass. Functional beta cell mass is defined by the beta cell’s ability to proliferate, secrete insulin, and resist apoptosis. Wehave shown that the orphan nuclear receptor Nr4a3 is sufficient to induce beta cell proliferation. We have sought to define compounds that can interact with and modulate Nr4a3 activity. Using AutoDock Vina we have defined a number of compounds that interact with Nr4a3. Here wepresent data demonstrating the ability of these compounds to modulate Nr4a3 mediated proliferation, survival, and insulin secretion in the beta cell. Furthermore, we demonstrate the effect of these compounds to modulate Nr4a3 transcriptional control. These findings are the basis for developing interventions to increase functional beta cell mass as a treatment for type 1 and type 2 diabetes.

Ultrasonic analysis of patellar tendon thickness in active older athletes

March 21, 2024 12:00 AM
Authors: Mikayla Kimball, Noah Bezzant, Ashley Allan, Josh Sponbeck. Mentors: Brent Feland. Insitution: Brigham Young University. Ultrasonic analysis of patellar tendon thickness in active older athletesBACKGROUND: Recent research has suggested that patellar tendon loading through exercise and resistance training can help maintain and increase patellar tendon thickness in older adults. Limited research exists that identifies the average thickness of patellar tendons in younger athletes, however, it is unknown if this thickness remains or is maintained in older adult athletes who have maintained a very active lifestyle.PURPOSE: This study aimed to determine how gender correlates to patellar tendon thickness in the proximal and middle patellar tendon of active older athletes participating in sporting events at the Huntsman World Senior Games.METHODS: Data was collected from 59 volunteers (participants in the Huntsman WorldSenior Games) in St. George, Utah, 2022. All subjects (34 females: mean age = 61.09 ± 7.00 yrs, Ht = 162.41 ± 25.73 cm, Wt= 66.29 ±11.38 kg; 25 males: mean age = 68.68 ± 7.03 yrs, Ht = 178.21 ± 8.63 cm, Wt= 84.42±10.90 kg) signed an approved consent form and then sat on a treatment table with their legs relaxed and dangling off. The probe was placed vertically below the kneecap and an ultrasonic image was taken. Each image showed a small section of the patellar for reference. Each ultrasonic measurement showed the middle and proximal thickness of the patellar tendon. ANALYSIS: All data were analyzed using JMP ver16.2 with a stepwise multiple regression analysis to determine the effect of age, height, wt and gender on patellar tendon thickness. A sex*location mixed model was used to determine differences in middle and proximal thickness between gender. Data were normally distributed, not requiring transformation.RESULTS & CONCLUSIONS: Proximal tendon measurements were thicker than middle tendon measurements on both sides (p=0.0001). There was no significant difference either proximal tendon thickness (p=0.9323) or middle tendon thickness (p= 0.3993) between left and right sides. No significant difference between male and female tendon thickness at either location (p=0.7700). Proximal tendon thickness was greater and this has been found to be greater in younger athletes with a history of patellar tendinopathy. Aging athletes may also have a history of knee pain episodes that could have contributed to this finding. The lack of gender differences in thickness measures was surprising, but may be a result of the level of activity of senior athletes. In the future studies should look to compare active vs non-active aging athletes, more specific age range differences, and how knee replacements and other injuries affect patellar tendon thickness.

Generative AI and Image Manipulation

March 21, 2024 12:00 AM
Authors: Tayler Fearn, Caroline Torgensen, Vern Hart. Mentors: Vern Hart. Insitution: Utah Valley University. Coherent diffraction imaging (CDI) is a newly developed modality used to measure phase shifts introduced by fine-scale structures in cells. These phase shifts can be used to distinguish healthy and malignant cells, providing a diagnostic marker for early cancer detection. However, this process, in which diffracted light interferes with incident light, requires collecting scattered photons at large angles, representing high spatial frequencies and short wavelengths. The highest frequencies, needed to reconstruct small details in cells for improved image quality, occur at distances of several centimeters from the central bright fringe. As such, these signals are faint and difficult to collect experimentally. We propose the use of deep learning to synthetically extrapolate diffraction patterns at large distances, where measurements are difficult. In prototyping this method, we will present results produced by a generative adversarial network (GAN), trained using existing data of watercolor paintings to preform style transfer and image extrapolation. This will be an essential step in working towards the larger goal of developing GAN’s that can accurately extrapolate diffraction images.

Thioredoxin-1 is essential for osteogenesis in vitro and in utero

March 21, 2024 12:00 AM
Authors: Caroline Cowley, Megan Jewell, Brenda Mendoza, Aubrey Cluff, Ryan Summerhays, Jason Hansen. Mentors: Jason Hansen. Insitution: Brigham Young University. Approximately 8 million newborns manifest a birth defect every year worldwide. One of the most common birth defects involve disruptions in musculoskeletal development. Oxidative stress has been found to propagate teratogenesis. Thioredoxin-1 (Trx1), an oxidoreductase, is an important antioxidant regulator required for proper embryonic development. Trx1 knockouts have been found to be embryolethal prior to implantation. A preliminary study to assess osteogenesis was conducted using mouse embryonic fibroblasts (MEFs) originating from transgenic conditional Trx1 knockout embryos. Upon confluence, MEFs were stimulated to undergo osteogenesis via commercially available media. A subset of cells were treated with doxycycline (DOX) prior to and throughout the culture period. MEFs were maintained over a 21 day period in a reduced oxygen environment. MEFs were then fixed in formalin and stained with Alizarin red to determine the degree of osteogenesis. MEFs treated with DOX were unable to undergo proper osteogenesis. While this would suggest that osteogenesis is regulated through proper functions of Trx1, it is unknown how Trx1 regulates osteogenesis in utero. Because Trx1 deletion is lethal prior to implantation it has been historically difficult to study the role of Trx1 during organogenesis. With the development of the DOX-inducible Trx1 conditional knockout mouse, we can now target specific developmental periods and evaluate post-implantation processes like osteogenesis. Using proper transgenic mice and breeding schemes, DOX-inducible Trx1 conditional knockout embryos were treated in utero with DOX through the dam’s drinking water, starting on gestational day (GD) 8.5. The embryos were collected on GD 16.5, fixed in 95% ethanol, and then skinned. To visualize bone and cartilage, the embryos were placed in ethanol and subsequently stained with Alizarin red and Alcian blue. The staining showed that embryos lacking Trx1 were significantly stunted in their skeletal maturation. With this data, we are the first to show that during organogenesis, the musculoskeletal system is affected by deletions of Trx1 at specific periods of development. Under oxidizing conditions which exceed the capacity of the oxidoreductase pathway of Trx1, Trx1 exists primarily in its oxidized form and can no longer reduce proteins that have been turned off by oxidation. Our Trx1 deletions model a highly oxidized state in which Trx1 is dysfunctional. Because regulatory redox control of protein activity is required for proper embryonic development, exposure to oxidizing environmental conditions specifically affecting Trx1 redox state may target the disruption of the musculoskeletal system.

Using Transfection as a Annotation-free Ground Truth for Training Noninvasive Metastatic Cancer Mapping Methods

March 21, 2024 12:00 AM
Authors: Drew Allred, Vern Hart. Mentors: Vern Hart. Insitution: Utah Valley University. Surgery remains one of the most common and effective treatments for a variety of cancers, especially those that form solid, localized tumors such as breast and colorectal cancers. During these treatments, the palpable lesion is surgically resected with the assumption that cancerous cells have metastasized to nearby tissues. As such, surgeons will excise a tissue margin surrounding the tumor in hopes of removing any additional cancer, thus preventing further spread of the disease. However, this process is time-consuming and requires specialized expertise from a trained pathologist to verify that all cancer has been removed. Furthermore, if the pathology report indicates that not all cancerous cells have been extracted, additional follow-up visits and surgeries are typically required. In recent years a number of non-invasive technologies have been developed which seek to map cancerous cells in whole tissues. Training and validating these methods still requires a reliable ground truth, typically provided by an annotated pathology report. We propose a simpler model in which two cell species were co-cultured to provide a heterogeneous training sample. One of these species (PANC-1) was transfected with a vector coding for a fluorescent marker to represent healthy tissue, while the other species (COS-7) remained untreated, representing cancerous cells. An experiment was then conducted using a coherent diffraction imaging (CDI) system, in which laser light incident on the cells was used to quantify phase shifts produced by each cell type. Fluorescent microscopy was then used to create a map of transfected and non-transfected cells for comparison. Results will be presented demonstrating a correlation between the phase shifts produced by the two cell types and the corresponding fluorescent images, potentially facilitating optical cell identification without the need for pathology.

Understanding Refractory Status Epilepticus with Novel HD-MEA Technology

March 21, 2024 12:00 AM
Authors: Isaac Stubbs, Skyler Russell, Melissa Blotter, Maxwell Holmes. Mentors: Ryley Parrish. Insitution: Brigham Young University. Status Epilepticus (SE) is a severe medical condition marked by continuous seizures lasting over 5 minutes. When SE becomes resistant to anticonvulsant drugs, the condition is known as Refractory Status Epilepticus (RSE), which lacks effective treatments and has a mortality rate of 38%. RSE lacks effective treatments partially due to our limited understanding of the mechanisms that lead to patient drug resistance to commonly used anticonvulsants. This study aims to address this knowledge gap in two pivotal ways.First, we have employed a high-density multi-electrode array (HD-MEA) with acute mouse brain slices to better understand RSE propagation patterns and various seizure states with unparalleled spatial precision. The HD-MEA allows us to record from the entire brain slice with 4096 electrodes sampling electrophysiological activity at every 60 micrometers for many hours at a time. Our data demonstrates that different seizure states, such as phasic seizure-like events, short duration epileptic discharges, or RSE itself, occur within both the same brain region and in different brain regions simultaneously. With our novel data visualization software, we can visualize the unique propagation of this phenomenon. These findings indicate that RSE might be a progressive event, challenging conventional understanding of RSE. Second, we are currently exploring a potential pharmacoresistance mechanism that may contribute to the patient entering RSE, which suggests that changes in the chloride reversal potential may lead to a phenomenon known as depolarizing GABA. Depolarizing GABA may negate the effectiveness of the currently used antiepileptic drugs that rely on standard physiological chloride conductance to effectively limit seizure activity. We are studying this drug resistant mechanism with the HD-MEA by introducing anticonvulsant drugs to acute mouse brain slices during the evolution of RSE to locate a critical point at which the slice becomes resistant to these compounds.We hope this study will illuminate the complexities of RSE by revealing its progressive nature and drug resistant properties.

Demonstration of Chloride Induced Spreading Depolarizations Using Halorhodopsin

March 21, 2024 12:00 AM
Authors: Hunter Morrill, Ryley Parrish. Mentors: Ryley Parrish. Insitution: Brigham Young University. Spreading depolarizations (SDs) are slow propagating waves of depolarization that move through the brain and have been associated with a wide variety of neuropathologies including the termination of seizures, the cellular correlate of aura in migraines, traumatic brain injury, and ischemic stroke. Though first characterized by Aristides Leão in the 1940s, only a very limited understanding of the mechanisms of SD induction has been achieved. SDs have been induced in mouse models using a variety of techniques, however regardless of the method of induction, high extracellular potassium and/or a strong cellular depolarization have been largely hypothesized as necessary conditions for SD induction. Interestingly, we have recently demonstrated that using a light-induced chloride pump (Halorhodopsin) to drive chloride ions into the neurons can reliably induce SDs even in the absence of high extracellular potassium levels (Parrish, 2023). It was also demonstrated that the triggering of archaerhodopsin, which removes protons from the cell and therefore hyperpolarizes the neuronal membrane without affecting chloride levels, did not induce SDs, suggesting the implication of chloride loading as a primary mechanism in SD induction. This challenges the prevalent hypothesis regarding the induction of SDs and results in a novel method of induction that allows for more characterization of the mechanisms involved. The use of genetically expressed light-gated ion channels or pumps is referred to as optogenetics. Using zebrafish, a common model for electrophysiology recordings that is also cost-effective to genetically manipulate, we have established an optogenetically induced model of SD induction. We are currently characterizing mechanisms that result in optogenetically induced SDs with pharmacology to further our understanding of SD initiation and propagation.Parrish, R. R.-G.-T. (2023). Indirect Effects of Halorhodopsin Activation: Potassium Redistribution, Nonspecific Inhibition, and Spreading Depolarization. The Journal of neuroscience: the official journal of the Society for Neuroscience, 43(5), 685-692.

Role Models v. Knowledge: Should we Use Different Evolution Teaching Strategies for Students with Varying Levels of Scientific Reasoning Skills?

March 21, 2024 12:00 AM
Authors: Grant Rousseau, Kenneth Harrington, Jamie Jensen. Mentors: Jamie Jensen. Insitution: Brigham Young University. We know that evolution acceptance is low in the United States, and a perceived conflict between evolution and religion is a big predictor of whether someone accepts or rejects evolution. Helping undergraduates accept evolution involves multiple teaching strategies, including teaching evolution with a reconciliatory approach, increasing their knowledge of evolution, and introducing role models (scientists who maintain religious beliefs) to the students. However, because some students have higher scientific reasoning abilities than others, they may find certain evolution teaching strategies more beneficial than others. In our study, we assessed scientific reasoning ability, change in evolution acceptance, and teaching strategy rankings with surveys before and after evolution instruction. We predicted that students who possessed more scientific reasoning skills would rank evolution knowledge above role models when asked which strategy was most influential in helping them accept evolution. However, we saw that scientific reasoning did not appear to moderate the effect of evolution knowledge. Role models were more important in increasing evolution acceptance, regardless of scientific reasoning skills. This reinforces the importance of having a role model present when teaching evolution to religious audiences.

Identifying the Interactomes of Disease-Causing CryAB Variants

March 21, 2024 12:00 AM
Authors: Joshua Evans, Allison Voyles, McKenzie Bellon, Julianne Grose. Mentors: Julianne Grose. Insitution: Brigham Young University. Alpha-crystallin B (CryAB) is a small heat shock protein that acts as a molecular chaperone and plays an essential role in cytoskeletal organization and myofibril function. Human mutations in CryAB have been associated with various diseases, such as cardiomyopathy and cataracts. However, the precise molecular pathways and protein substrates of CryAB are not yet fully understood and require further investigation. This project aims to increase understanding of CryAB by determining proteins that bind wild-type versus disease-causing variants using yeast two-hybrid screens. It also involves testing for binding specificity of variant-binding partners. A series of these Y2H screens gives valuable information regarding the binding patterns of CryAB, showing distinct binding partners for different alleles of CryAB. Overall, the project provides greater insight into the molecular functions of CryAB as well as a better understanding of the dysfunctional pathways of its disease-causing variants—a factor which may, in the future, have potential applications to the treatment of related diseases in a clinical setting

The Role of Sirt7 in Beta Cell Function and Insulin Secretion

March 21, 2024 12:00 AM
Authors: Trevor Kendrick, Jakob Lenker. Mentors: Jeff Tessem. Insitution: Brigham Young University. Diabetes is a chronic metabolic disease characterized by an inability of beta cells to produce or secrete insulin due to decreasing beta cell mass, a condition induced by beta cell death or overuse. Current treatment consists of daily administration of insulin to diabetic individuals. We have shown that Sirtuin 7 (Sirt7), a deacetylase located in the nucleus, directly interacts with Nkx6.1, a transcription factor essential for beta cell function and proliferation. We have shown that one of the post translational modifications that impinges on Nkx6.1 activity is acetylation. Given Sirt7’s role as a deacetylase, and published reports demonstrating its impact on glucose stimulated insulin secretion (GSIS), we hypothesized that the interaction between Nkx6.1 and Sirt7 maybe needed for the Nkx6.1 mediated enhancement of glucose stimulated insulin secretion. Here we present data regarding the interaction between Nkx6.1 and Sirt7 in terms of Nkx6.1 acetylation status, effect on GSIS, and the effect of cultured glucose concentration on this interaction. These findings may be leveraged to develop interventions to better treat patients with type 1 and type 2 diabetes.

Does Sonographically Measured Articular Cartilage Thickness Correlate With Knee Pain in Senior Athletes?

March 21, 2024 12:00 AM
Authors: Noah Bezzant, Mikayla Kimball, Ashley Allan. Mentors: Brent Feland. Insitution: Brigham Young University. BACKGROUND: General knee pain is a common complaint among both athletes and older adults. Osteoarthritis is a common etiology for knee pain that can interfere with function during aging and can be assessed by validated questionnaires. It remains unclear whether there exists a dose–response relationship between cartilage loss and pain worsening. Articular cartilage thickness of the femoral condyles can be measured by ultrasound imaging and few studies utilizing this form of measurement exist. It is currently unknown if articular cartilage thickness measured ultrasonographically correlates with pain related ratings in aging athletes. PURPOSE: The aim of this study was to assess whether articular cartilage thickness at the femoral condyles as measured by ultrasound imaging has any relationship to knee pain as rated by the modified KOOS (Knee Injury and Osteoarthritis Outcome Score) survey in senior athletes over the age of 50.METHODS: Data was collected from 35 volunteers (participants in the Huntsman World Senior Games) in St. George, Utah, 2023. All subjects (22 females: mean age = 64.9 ± 6.6 yrs, Ht = 158.7 ± 35.6 cm, Wt= 66.3 ± 10.0 kg; 13 males: mean age = 67.3 ± 8.3 yrs, Ht = 179.3 ± 10.7 cm, Wt= 84.3 ± 13.4 kg) signed an approved consent and completed a modified KOOS survey before being seated on a table, with their back flattened against the wall directly behind them. They were then asked to bring either knee as deeply into flexion against their torso as possible; approximating 120°-140° of knee flexion, depending on the range of motion the subject was capable of. In flexion, the patella was shifted inferiorly enough to expose the femoral condyles so that a short axis image of the articular cartilage was obtained and the thickness of the cartilage was assessed at 3 points.ANALYSIS: All data were analyzed using JMP ver16.2 with a Pearson product pairwise correlations to determine if a relationship between average cartilage thickness correlates with pain subscale scoring from the KOOS in males and females. Correlation between age and thickness was also examined.RESULTS AND CONCLUSION: There were no significant correlations between the pain subscale score and cartilage thickness in males (p=.6998, r=0.1316), females (p=.8733, r=0.0392), or combined (p=.7308, r=0.0655) in this group of senior athletes. Age and thickness was not significantly correlated (p=.1232, r= -0.2877), but did show a trend of decreasing cartilage thickness with age. The addition of more subjects should show age and thickness to be negatively correlated with each other.

Glutamine as an Acetyl-lysine Mimic in Nucleosome Positioning Studies

March 21, 2024 12:00 AM
Authors: Michael Mann, David Bates, Steven Johnson. Mentors: Steven Johnson. Insitution: Brigham Young University. Nucleosome positioning, or the placement of nucleosomes along DNA, is known to be a significant factor in determining gene expression in eukaryotic cells. Further, post-translational modifications (or PTMs) help modulate gene expression by acting as an intermediate to other factors. The extent to which PTMs directly affect nucleosome positioning is poorly understood, however. Since gene expression is known to be affected by several coincident PTMs on each histone, the goal of this research is to evaluate the suitability of a Lys-->Gln mutation as a substitute for histone lysine acetylation. If successful, this research can be used to support future combinatorial studies on PTMs and nucleosome positioning without the difficulty of combining several forms of PTMs simultaneously.

Panic Disorder Lesion Network Mapping Abstract

March 21, 2024 12:00 AM
Authors: Zach Moore, Owen Benzley, Austin Flitton, Frederic Schaper, Jared Nielsen. Mentors: Jared Nielsen. Insitution: Brigham Young University. Objective: Identify neural networks that are associated with panic disorder symptoms through lesion network mapping.Background: Panic Disorder is a neurological disorder in which one experiences unexpected and reoccurring panic attacks. Panic attacks can be characterized by the following symptoms: trembling, racing heart, excessive fear and worry, weakness, tingly hands, chest pain, or a feeling of unreality. A proposed circuit for panic disorder includes the amygdalofugal pathway, which deals primarily with the amygdala. The lesion network mapping method uses functional connectivity to identify neural networks associated with symptoms arising from brain lesions. This is a benefit compared to previous studies done on panic disorder because it relates brain circuits to symptoms rather than individual regions.Methods: 21 lesions causing Panic Disorder were found in the literature, traced on a standard template, and analyzed using lesion network mapping. Specifically, lesion networks for each lesion were calculated using a large cohort of healthy control resting state scans (N = 1000). In our sensitivity analysis, overlap between lesion networks was observed. Results: Of the 21 lesion networks, 14 (67%) positively overlap on the parahippocampal gyrus in the sensitivity map; 13 (62%) positively overlap at the ventral tegmental area in the sensitivity map.Discussion: Symptoms of panic disorder may be associated with the parahippocampal gyrus and ventral tegmental area of the brain. These results found are unique compared to previous studies, but do have general connections.

The Caregiving Experience for Children Diagnosed with Cancer: A Secondary Analysis

March 21, 2024 12:00 AM
Authors: Sofia Denise Flowers. Mentors: Lauri Linder. Insitution: University of Utah. Background and Purpose: In the year 2023, roughly 9,000 children will be diagnosed with cancer each year in the United States. Dealing with a potentially fatal diagnosis is already difficult for many grown adults, let alone a young child. The aim of this project is to describe caregiving experiences of parents and children with cancer as related through feedback comments within written and oral feedback to proposed items to measure self-efficacy for managing their child’s symptoms and behaviors used to manage their child’s symptoms.Methods: This project involved a secondary analysis of qualitative data from 21 parents (19 mothers; mean age 38 years) of school-age children with cancer who participated in a study to establish the content validity of instruments to measure aspects of symptom management. Data consisted of interview transcripts and free responses to the content review surveys. The data were then uploaded to Dedoose. My mentor and I worked independently to identify statements pertaining to parents’ experiences in managing their child’s symptoms and responding to the child’s cancer diagnosis. We then met together to reconcile content and then organize parents’ statements into categories and subcategories. Results: 101 excerpts were extracted from the transcripts and included for the secondary analysis. Excerpts were grouped into four main categories: informational resources, social support, emotional support, and medication management Within these four main categories, subthemes of professional staff support, managing child attitude and mood changes, and balancing between being a parent and their child’s medical advocate were present. Conclusion: The insights gained from this project can guide the information healthcare providers need to provide better care to the child and additional support to parents. This can allow professional staff to get a stronger understanding of not just the family’s medical needs but their informational, social, and emotional needs as well.

Hyperglycemic Conditions Impair Essential Nkx6.1 Expression in Beta Cells

March 21, 2024 12:00 AM
Authors: Jared Wieland, Jacob Herring. Mentors: Jeffery Tessem. Insitution: Brigham Young University. A central attribute of Type 2 Diabetes (T2D) is beta cell damage. This damage commonly affects beta cell’s ability to secrete insulin and regulate blood glucose levels. Nkx6.1 is a beta cell transcription factor essential for proliferation, differentiation, and glucose-stimulated insulin secretion. Hyperglycemia is detrimental to beta cell function and function. We hypothesize that hyperglycemia may negatively affect the expression and activity of beta cell transcription factors, including Nkx6.1. To provide an understanding of the effects of hyperglycemic conditions on Nkx6.1 expression, INS-1 832/13 beta cells were cultured in hyperglycemic conditions, then primary rat islets were treated for the same durations of time. Here, we present transcriptional, translational, cellular localization, and degradation of states of Nkx6.1 over 48 hours of hyperglycemic culture conditions both in vitro and ex vivo models. Comprehension of the mechanisms involved in hyperglycemic downregulation of Nkx6.1 is imperative to the development of treatments for diabetes.

Transcriptome-Based Risk Score Predicts Time to First Treatment for Multiple Myeloma Patients

March 21, 2024 12:00 AM
Authors: Ishmael Elliott Molina-Zepeda, Brandt Jones, Myke Madsen, Douglas Sborov, Brian Avery, Nicola J. Camp . Mentors: Nicola J. Camp. Insitution: University of Utah. Multiple Myeloma (MM) is a malignancy of plasma cells and one of the more common hematological malignancies (6.3/100,000 new cases/year). Although treatments have improved, most patients fail their first line of treatment and ultimately do not survive beyond 5 years. Identifying patients at high risk of failing treatment early is a critical need. SPECTRA is a statistical technique developed by the Camp Lab to characterize global gene expression (the transcriptome) by representing it as multiple quantitative tumor variables. Spectra variables allow gene expression to be incorporated into predictive modeling to identify high-risk groups.Transcriptome data for myeloma cells was available from 768 patients in the international CoMMpass study where 39 spectra variables were derived. Each patient has a value for each of the 39 variables (their spectra “barcode”); patients can be compared for each bar in the barcode. Predictive modeling using spectra variables was successful in identifying risk groups for time to treatment failure, such that a patient’s tumor transcriptome can be used to predict whether they are at high risk of having their treatment fail earlier.To replicate the CoMMpass data findings, we collect and process local biological samples from MM patients at the Huntsman Cancer Institute (HCI). We collect bone marrow samples, which are then cell-sorted to identify tumor (CD138+) cells. RNA is extracted from these cells and sequenced to generate transcriptome data. Then the spectra barcode is calculated.Utilizing the SPECTRA technique provides a more complete understanding of MM by better characterizing the tumor. Each spectra is a tumor characteristic. Our future research includes an investigation of whether inherited variations (in normal DNA from saliva or whole blood) are associated with the transcriptome risk score. We are also pursuing the SPECTRA technique in several other cancers.

Investigating Intraspecific Temporal Behavior in Mule Deer (Odocoileus hemionus) across Life Stages: Fawning and Non-Fawning.

March 21, 2024 12:00 AM
Authors: Danielle Terry, Seth Helton, Michael Creer. Mentors: Austin M Green. Insitution: University of Utah. With anthropogenic influence increasing worldwide, it is important to understand how wildlife behavior changes in response to urbanized landscapes. Urban ecosystems represent relatively novel landscapes with unique threats and opportunities that can completely restructure species’ population composition and dynamics. Mule deer (Odocoileus hemionus) have been shown to alter their temporal activity in response to urbanization across their range of the Intermountain West of the United States. In this study, we will investigate the effects of anthropogenic influence on mule deer temporal activity behavior across two distinct life stages: fawning and non-fawning. Data for this study will come from the citizen science camera trapping project, Wasatch Wildlife Watch. The full project area is separated into two study sites: “Rural” and “Urban”. This study will be based around the wild-to-urban interface of the Central Wasatch Mountain Range and the Bear River Mountain Range, which composes some of the most highly recreated portions of the Uinta-Wasatch-Cache National Forest, receiving approximately 9,000,000 visitors annually (U.S Forest Service). We will investigate the proposed differential effects of anthropogenic influence and urbanization on mule deer diel activity patterns in the fawning vs. non-fawning life stages. Also, we will inquire whether intraspecific responses in mule deer diel activity alter interspecific interactions, especially with fawning predators, and how these responses might interact with environmental factors. We predict that anthropogenic influence and urbanization alter the diel activity patterns of fawning mule deer more than non-fawning deer and that the presence and activity of fawn predators (e.g., coyote [Canis latrans]) would have a stronger effect on fawning deer activity than non-fawning deer activity.