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Fine Arts

Navigating Neurodiversity Online: Inclusive Educational Materials for Autistic Learners

March 21, 2024 12:00 AM
Authors: Sara Peel, Addisyn Bushman, Adam Rice. Mentors: Xinru Page. Insitution: Brigham Young University. Social media has become a tool used in everyday life by individuals worldwide. While this tool can help individuals build new social connections and strengthen relationships, it can be a lose-lose situation for certain populations. Recent work has found that autistic users are one of these populations that experience greater harm and negative experiences using social media. These additional harms stem from differences in how autistic individuals perceive social media norms and interpret online interactions. We have developed 16-week’s worth of digital educational material based on this research to teach autistic young adults social media literacy for Facebook and Instagram, to mitigate some of these social media challenges. With input from a multi-disciplinary team of autism researchers and a panel of autistic students at our university, we created these educational materials to be taught in 1-hour weekly sessions to individuals with autism in a classroom environment. The materials consist of topic-based slides and associated practice exercises that employ a decision-based learning approach that breaks down complicated decisions into several simpler choices. To determine whether participants have learned safer online behaviors, we administer scenario-based assessments at the beginning and end of each session, conduct daily diary-based check-ins, and weekly one-on-one interviews, and analyze behavioral data collected from their personal social media accounts such as posted comments and responses to connection requests.We are currently deploying the 16-week educational course at a local day program to autistic young adults who have no intellectual disability and have had negative experiences using social media. Initial results indicate that the educational materials are helping mitigate the harms of social media. Participants have shared that the educational sessions taught them to disconnect from potentially unsafe users, learn social tags and interaction norms, and change safety settings within each app that they weren’t aware they had control over. In addition to the current longitudinal study, we have several other field deployments planned in the coming months which will allow us to refine the digital assets for this educational intervention in preparation for making them available to the public.

Guidelines for Manufacturing Compliant Mechanisms using 3D Printing

March 21, 2024 12:00 AM
Authors: Austin Martel, Bethany Parkinson, Spencer Magleby. Mentors: Spencer Magleby. Insitution: Brigham Young University. Compliant mechanisms are gaining popularity for use in engineering systems due to their low cost, manufacturability, and predictability. These monolithic structures can accomplish the same function as rigid multi-body mechanisms and can improve the motion and performance of the mechanism. Because they are monolithic, 3D printing has proven to be a simple and favorable method of bringing compliant mechanisms from design to reality. However, fabricating these mechanisms using conventional approaches of 3D printing can negatively affect their mechanical properties. To combat these adverse effects, we need to identify printing parameters that affect the mechanism’s material properties. Then, by adjusting the values of these parameters in the 3D printer’s slicer software we can minimize these adverse effects and create a better-suited set of guidelines to print compliant mechanisms.In this study, multiple compliant mechanisms were designed and tested with different printer settings. The testing started with creating mechanisms and their force-deflection curves. The standard designs of each mechanism were then updated and printed using different parameters from the slicer software. Parameters such as orientation, infill, wall thickness, nozzle path, and ironing were considered and quantified. After printing, the mechanisms were tested on an INSTRON machine to get the experimental force-deflection curves. We iterated upon each design until there was less than a 5% error between the experimental and theoretical data. With more knowledge of the effects of 3D-printing parameters, we can develop a set of guidelines for manufacturing more predictable compliant mechanisms. These guidelines can be applied to any compliant mechanism design for industrial or personal 3D printing.

Neural Gene Expression: An Insight into Opioid Addiction

March 21, 2024 12:00 AM
Authors: Addison Smartt, Timothy Smartt. Mentors: Jeff Edwards. Insitution: Brigham Young University. Since the 1990's, the United States has experienced a crisis of opioid addiction and overdose. The effects of this are found close to home – with Utah being one of 22 states with an overdose rate higher than the national average. The effects of opioids on the ventral tegmental area (VTA), also known as the reward center of the brain, are a major contributor to opioid dependence. Drug dependence is created by molecular and cellular changes in this region of the brain. Therefore, we will examine changes in gene expression in the reward center in response to chronic morphine exposure. To do this, we will employ quantitative PCR on the VTA by first isolating mRNA, then reverse transcribing it into a cDNA library. Next, we created primer pairs for 26 different gene targets that were selected for their participation in the reward pathway. These targets include opioid receptors, glutamate receptors, cannabinoid receptors, and transcriptional regulators. Early results have identified mu and kappa opiate receptor expression downregulation after morphine exposure. Collectively, our data will provide understanding into how morphine exposure changes the expression of important gene targets in the VTA, providing insight into the causes, symptoms, and treatment options for opioid use disorder.

ROSflight: A Lean Research Autopilot

March 21, 2024 12:00 AM
Authors: Jacob Moore, Ian Reid, Brandon Sutherland. Mentors: Tim McLain. Insitution: Brigham Young University. Autonomous unmanned aerial vehicle (UAV) research depends on autopilots capable of integrating new, low-level estimation and control algorithms. Current autopilot software stacks (eg. PX4 and Ardupilot) are bulky and complex, making it difficult for researchers to easily integrate their own algorithms. The codebases for these autopilots are fully-featured, meaning complete understandability is impossible. Furthermore, these autopilots are targeted towards industry and plug-and-play use, not researchers. A research-centered autopilot, with a lean codebase, capable of easy algorithm integration is a needed tool for productive research. ROSflight is an autopilot designed from the ground up with researchers in mind. Currently it is based on a ROS1 framework, which is old and outdated and is reaching end of life. Our research is to update ROSflight to ROS2, the most current version of ROS. Our work includes revamping the existing fixed-wing autopilot, ROSplane, and multirotor autopilot, ROScopter, and extending ROSflight to support vertical takeoff and landing (VTOL) aircraft. Since we started the project, ROSplane and ROSflight now work under a ROS2 framework. We have verified autonomous flight on a fixed wing aircraft, capable of rejecting disturbances. Hardware demonstration of a GPS waypoint-following fixed wing aircraft is in progress. Future work includes hardware demonstration of a multirotor aircraft autopilot and support for a VTOL aircraft.

The effects of access to healthcare in varying levels of urbanization on mortality.

March 21, 2024 12:00 AM
Authors: Jaren Wilson. Mentors: Joshua Price. Insitution: Southern Utah University. Rural health has been an area of study for population for years as over 46 million Americans live in rural communities as of 2021. Access to healthcare has been suggested as a major disparity of this population. This study examines how the access of healthcare of varying degrees of urbanization impact mortality outcomes, using the number of physicians per 100,000 people as a proxy for the access to health care. Using a dataset over 3,000 counties in the United States over the span of four years we assess the disparities in healthcare access between different geographic locations.The study implores the use of a multivariable regression model controls for time, level of urbanization, physicians per 100,000 people, time, county fixed effects, and other factors regresses the number of mortalities. The goals of this study are to demonstrate the disparities in healthcare access in different geographic locations across the United States.

Intact endothelial cell autophagy attenuates outcomes of acute ischemic stroke in mice

March 21, 2024 12:00 AM
Authors: Milo E Light, Sohom Mookherjee, J. David Symons, Megan Tandar, Nathan Hill. Mentors: John David Symons. Insitution: University of Utah. Acute ischemic stroke (AIS) deprives cerebral artery endothelial cells (ECs) of nutrients which decreases mTORC1 activity to initiate autophagic flux. We hypothesized that depletion of EC autophagy worsens outcomes of AIS. Methods and results. First, adult male C57Bl6 mice consumed a standard diet (control) or chow supplemented with the mTORC1 inhibitor rapamycin. After 3-weeks, phosphorylated ribosomal S6 / total S6 was greater (p<0.05) in liver segments of rapamycin vs. control-fed mice, indicating mTORC1 repression. Transient middle cerebral artery occlusion (tMCAO, 60-min;) followed by reperfusion (R, 23 h) increased infarct volume, neurobehavioral deficits, and motor dysfunction, to a greater extent (p<0.05) in control vs. rapamycin-supplemented mice. Second, adult male C57Bl6 mice with intact EC autophagy-related protein 3 (Atg3WT) or inducible depletion of EC ATG3 (Atg3EC-/-) completed tMCAO+R. ATG3 colocalization with VE-Cdh5 increased (p<0.05) after tMCAO+R in ipsilesional vs. contralesional hemispheres of Atg3WT but not Atg3EC-/- mice. Neutrophil infiltration, cell death, microglia and astrocyte activation, and neurodegeneration, were greater (p<0.05) in ipsilesional hemispheres of Atg3EC-/- vs. Atg3WT mice. Further, infarct volume was greater (p<0.05), and motor and neurobehavioral performance were worse (p<0.05), in Atg3EC-/- vs. Atg3WT mice. Third, tMCAO+R evoked infarct volume was less severe after rapamycin feeding in Atg3WT but not Atg3EC-/- mice, underscoring the importance of EC autophagy. Conclusions. Intact EC autophagy is protective concerning AIS, potentially via enabling: (i) recycling of damaged proteins; (ii) nutrient generation from degraded substrates; and / or (iii) arterial vasodilation for nutrient delivery.

Rotational Robotic Trigger

March 21, 2024 12:00 AM
Authors: Mitch McEntire. Mentors: Marc Killpack, John Salmon. Insitution: Brigham Young University. Title: Rotational Robotic TriggerPresenter: Mitch McEntire, College of Engineering, Mechanical EngineeringAuthors: Mitch McEntireFaculty Advisor: Marc Killpack and John SalmonInstitution: Brigham Young UniversityRobotic manipulation is commonplace on the factory floor but there are often safeguards that prevent direct human-robot interaction. This study aimed to move human-robot interaction into the next phase from separate tasks, to cooperative ones. We started by trying to understand how multiple human teammates communicate during co-manipulation tasks in order to enable humans and robots to eventually work together effectively. This study analyzed the communication forces sent through an object that was being co-manipulated by a triad and dyad of humans. For this presentation, we focused entirely on the task of rotation along the sagittal axis shared between the individuals. In this case, we are able to notice a torque that was transmitted through the object indicating the desired change in orientation of that object. Each trial consisted of carrying a 55 lb table between two individuals and placing the table in different orientations and positions. Data was collected with force-torque sensors at each handle of the table and position data of the table was being tracked by HTC Vive trackers designed for use in virtual reality systems and that were strategically placed around the table. We analyzed 23 of these trials and we were able to identify specific force trends that indicate the table is about to rotate. Once data was collected and analyzed, potential force triggers were extracted from the data. This data is one small step to understanding how humans manipulation teams work together successfully and enabling a robot to be able to cooperate with humans in applications such as carrying a stretcher or moving furniture.

The Gender Pay Gap in FinTech: An Analysis of Womens Compensation in the Industry

March 21, 2024 12:00 AM
Authors: Rachel Bi, Chong Meng. Mentors: Rachel Bi. Insitution: Utah Valley University. The full proposal is available upon request. This research project is sponsored by the Bonnie Ballif-Spanvill Endowed Fellowship, which provides $10,000 in funding.Abstract:Over the past decade, the financial technology (FinTech) industry has experienced remarkable growth and innovation, with new products and services designed to meet the evolving needs of consumers. This rapidly expanding force is challenging and disrupting traditional financial industries in terms of product innovation, customer satisfaction, and employer demand in the labor market. In fact, global FinTech investments have soared from less than $2 billion to an impressive $142 billion in 2021, and this upward trend is expected to continue (Balyuk, Berger, and Hackney, 2020). While previous studies have focused on the impact of FinTech on income inequality, little is known about the potential of this digital technology to address gender inequality (Loko and Yang, 2022).This proposal seeks to address a specific aspect of gender inequality: the gender pay gap in finance. This term refers to the wage disparity between male and female executives in the industry. Our objective is to analyze women's compensation within the FinTech sector, identify factors contributing to the gender pay gap, and develop recommendations to address this issue. Specifically, we have the following hypotheses:H1: Gender pay gaps among executives should shrink in the FinTech industry.Public FinTech firms are typically younger and smaller than other publicly traded companies. Because managers in smaller firms are generally less risk-averse and have a stronger preference for taking risks, we hypothesize that the gender pay gap between female and male executives could widen due to differences in risk-aversion.H1a: Gender pay gaps among executives should enlarge in the FinTech industry.Our second hypothesis centers on comparing gender pay gaps in the pre- and post-initial public offering (IPO) stages of the same company. The public market is widely recognized as crucial in overseeing and limiting managers' pursuit of risk (Asker, Farre-Mensa, and Ljungqvist, 2015). If executives' risk aversion changes with access to the public market, we anticipate that gender pay gaps will decrease following IPOs. Therefore, H2: Gender pay gaps among executives should shrink in FinTech firms after their initial public offerings. Institutional investors in the public market can shape the internal corporate governance structure (Dasgupta, Fos, and Sautner, 2021). We anticipate that board diversity, measured by the percentage of female executives on the board, will increase after IPOs. Consequently, we predict that the changes in gender pay gaps between the pre-IPO and post-IPO periods will be more noticeable when the board is less diverse prior to IPOs. H2a: The decrease in gender pay gaps should be more pronounced when the board of a Fintech firm is less diversified before IPOs.

Pollen DNA Metabarcoding to Analyze the Effect of Formic Acid Treatment on Foraging Behaviors of Apis mellifera

March 21, 2024 12:00 AM
Authors: Claudia Wiese, Josh Steffen, Heather Briggs, Rodolfo Probst. Mentors: Josh Steffen. Insitution: University of Utah. Evaluating effect of formic acid treatment on foraging behaviors of Apis mellifera through pollen DNA metabarcoding using the MinION deviceBees play a vital role in maintaining the health and productivity of terrestrial ecosystems by providing pollination to many of the world’s plants. In recent decades, many bee species, including Apis mellifera (European honeybee), have experienced worldwide population declines.Varroa destructor, an external parasite, is one of the leading causes of honeybee population declines, as they are the primary cause of colony collapse disorder.Various methods exist to control the impact of V. destructor, including Formic Acid (FA) treatment, a well-documented solution to reducing V. destructor numbers. Yet, despite clearly established evidence that A. mellifera behaviors are very sensitive to changes in their hive environment, very few studies have looked at the effect of FA on honeybee foraging behavior. DNA metabarcoding is a powerful tool allowing ecologists to quantitatively assess differences in diet within species without the need for extensive knowledge of pollen taxonomy or complicated fieldwork experiments.In this study, A. mellifera hives (n=7) were split into control (n=3) and treatment groups (n=4). Pollen samples were collected from all hives before, during, and after FA treatment to compare if FA application impacted the foraging patterns of the bees in the treated colonies as compared to the control group. To compare foraging patterns between the treatments, we performed metabarcoding using the trnL (UAA) chloroplast intronic region, commonly used to barcode plant species. Amplicons were subsequently sequenced with a portable sequencer (ONT MinION Mk1C). Basecalling, quality check, demultiplexing, and filtering of the data were conducted with Guppy and Medaka. Obtained sequences (n=120 reads) were compared to a reference database with BLAST to determine the sequence identity of visited plants. With this information, we plan to compare absolute foraging numbers, species, and related ratios between control and experimental hives. Most sequences were assigned with a high percentage identity to a sample database (>89%), Although certain species (e.g., Malus sylvestris [European crab apple] and Prunus avium [wild cherry]) were probably visited by all hives, our preliminary findings show that pollen loads differ between control and experimental conditions, indicating a variation in floral visitation.These results suggest that FA treatment, while effective at controlling V. destructor, may impact honeybee foraging patterns. Further research is needed to understand if this behavioral change is detrimental to the health of the colony, and the consequences of variation in floral visitation to pollination networks.

What Makes a Legend: Characterization’s Role in Arthurian Universality

March 21, 2024 12:00 AM
Authors: Em Hart. Mentors: Nicole Dib. Insitution: Southern Utah University. The legend of King Arthur has withstood the test of time unlike any other work of literature. Not only is a tale originating from a post-Roman Britain still known today, it is influential and pervasive, impacting the building blocks, themes, and motifs of contemporary stories in genres ranging from fantasy to superheroes to propaganda pieces. Given the legend’s undeniable influence, it sparks the question of what characteristics have allowed this tale to transcend the standard literary lifetime. One theory attributes the legend’s universality to the romantic narrative structure that it gained during the French Vulgate Cycle in the thirteenth century. Though undoubtedly a contributing factor given the structure’s popularity at the time, this theory neglects to consider more common and proven factors of audience appeal, particularly the appeal that similarly transcends temporary trends and tastes. When considering Arthurian legend’s universality, it is important to acknowledge what elements remain consistent over the centuries as opposed to what has more freedom to change with the shifting tastes of the cultures it touches. Arthurian legend, despite the massive changes it has undergone, maintains elements that allow audiences across time to accurately identify it as Arthurian legend. Though stories can carry elements popularized or introduced by Arthuriana in the modern day, those elements do not necessarily make that story Arthurian in the perception of the reader. However, there are stories that change narrative structure, medium, time, place, and even popular plot points, that are still recognized as Arthurian. A similar phenomenon can be seen outside of Arthuriana in more contemporary stories that outlast their expected literary lifetimes. With this in mind, this presentation will consider the ways that Fan Studies explore the communities, individuals, and passions that have replicated this phenomenon. When engaging with this area of study and the elements that source it, a pattern emerges, showing a characteristic that commonly fuels the burgeoning universality of these celebrated stories. In fan works, things like narrative structure, medium, time, and plot all change freely, allowing for the consistencies to become clear. The characters, their bonds, their flaws, and their dramatic needs remain consistent across ever-changing landscapes, be it in fandom circles or the centuries and cultures touched by Arthurian legend. With this guide from other stories and their early universality, my paper will make it clear that an audience appeal substantial enough to transcend centuries is ultimately accessed through characterization, an essential element of the Arthurian legend.

Subconscious Comprehension of Structural Forms: An Eye-Tracking Study

March 21, 2024 12:00 AM
Authors: Jared K Bradshaw. Mentors: Brandon Ro. Insitution: Utah Valley University. This research seeks to analyze if there exists an understanding of structural design principles among untrained humans. Building forms and styles have evolved since the earliest structures. For thousands of years buildings were limited by naturally occurring materials. Designs of those periods reflected the structural principles of those materials. In the last few hundred years technological advances have provided structural methods which radically altered how buildings can be designed. An example is the difference in column spacing between historic and modern buildings, where the former has much tighter spacing due to natural material’s spanning limitations. To analyze the understanding of untrained humans an eye-tracking study was conducted using A.I.-3M-VAS eye-tracking software. This technology utilizes artificial intelligence to graphically display eye gaze sequences, patterns, and durations of focus. The software reflects the first few seconds of eye-tracking, providing insights into subconscious reactions before a logical response is formed. Images of structural elements were designed digitally to reflect a variety of forms, maintain cohesiveness, and remove visual variables. Each image was individually processed through the software providing isolated results. The results of the study show consistent patterns of focus on locations of structural significance, such as bearing points, connections, and material loads. The consistency by which these concepts received focus concludes that there is an innate human ability to locate structural methods of building. Of note the structural forms which adhered to the limits of natural materials registered different eye tracking patterns than the modern manipulated material forms. The historic methods displayed even tracking throughout the structure, whereas the modern methods created hot spots at the points of greatest structural significance. The differences further emphasizes that untrained people are not limited to just understanding familiar structural forms. This will allow for further research on the physiological effects between form types.

Crafting Secure System Messages

March 21, 2024 12:00 AM
Authors: Spencer Thompson. Mentors: Sayeed Sajal. Insitution: Utah Valley University. The widespread use of Large Language Models (LLMs) in various industries raises critical concerns about user data privacy and security. This research focuses on two key vulnerabilities: prompt attacks and unauthorized retrieval of sensitive training data. We employ a straightforward methodology to craft effective system messages that neutralize malicious queries in real-time, thereby mitigating prompt attacks. To prevent the unauthorized extraction of sensitive information, we build on the concept of strong system messages. We aim to identify a system message that minimizes computational overhead while maximizing effectiveness. Our results demonstrate that a strategically-crafted system message can guide an LLM's output in a manner that enhances data security without compromising computational efficiency.

An Analysis of the Neuroscience of Love and the Physiological Similarities it Holds to Addiction

March 21, 2024 12:00 AM
Authors: Audrey Wells. Mentors: Fredric Govedich. Insitution: Southern Utah University. This project is an interdisciplinary meta-analysis of literature across neuroscience, psychology, biochemistry, and biological anthropology. I am interested in comparing the neural physiology of love relationships to that of recreational drug use. I have cross referenced studies on the areas of activation and neurotransmitter level changes for each of these experiences. Both of these activities, specifically when comparing drugs to the infatuation stage of a relationship, show a dramatic increase in the reward complex within the center of the human brain, as well as an increase in risky behavior and obsession with the object of attraction/addiction. I then continued in an analysis of the termination from either positive stimuli, namely, rejection from a lover, and recreational drug withdrawal. I have found that within the motivational sectors of the brain, activation when viewing your rejector, as well as the heightened dopamine produced, show comparable similarities to those who are experiencing an active physiology drug withdrawal.

Group Theory for Procedural Content Generation: Towards Generating Objects from Mathematical Description

March 21, 2024 12:00 AM
Authors: Jonas P Knochelmann. Mentors: Rogelio E. Cardona-Rivera. Insitution: University of Utah. Despite the highly technical nature of Procedural Content Generation (PCG), the holistic study of the discipline is minimal and qualitative. We argue that this gap exists because there is no formal framework to talk about PCG artifacts and algorithms and propose the mathematical field of group theory to serve as such a framework. Group theory is a well-established discipline that has been embraced in chemistry, physics, and art, with tools for analyzing, combining, and generating objects based on their structure. We outline a specific method for applying group theory to PCG and explore a number of case studies in the hopes of developing a more unified formal framework for future study.

The effects of stinging nettle oil on the vascular smooth muscle in frogs

March 21, 2024 12:00 AM
Authors: Tia Dudley, Ty Erickson. Mentors: Matthew Weeg, Mary Jo Tufte. Insitution: Southern Utah University. The pharmacological investigation of plant essential oils has been expanding due to their suspected health implications. Research supports that plant essential oils have cardiovascular benefits, including reducing blood pressure and managing hypertension. Our research centers on stinging nettle and its effect on the vasculature in frogs. Existing evidence shows that stinging nettle can be used to treat hypertension, a disease intensified by vasoconstriction. Our study aims to investigate if stinging nettle causes a relaxation in smooth muscle and vasodilation. We administered stinging nettle on the vasculature in frogs and measured the diameter of the blood vessels before, during, and after the application. Results show that the application of stinging nettle has a vasodilating effect on some of the smaller blood vessels. The vasodilation is a potential mechanism for the anti-hypertensive effects of stinging nettle. These findings illustrate a probable avenue in cardiovascular medicine and highlight the potential of plant oils in reshaping the landscape of modern health.

Foreign Textiles at the Early Christian Fag el-Gamous Cemetery in Egypt

March 21, 2024 12:00 AM
Authors: Jenna Norris. Mentors: Kerry Muhlestein. Insitution: Brigham Young University. In the hot and dry climate of the Fag el-Gamous Cemetery in Egypt, a wide range of elaborately woven textiles have been preserved, each with unique characteristics and technical elements. Through analyzing technical elements, this research aims to reveal evidence of foreign textile production or materials incorporated in Fag el-Gamous burials. The BYU Egypt Excavation Team has been excavating at the cemetery for over 40 years, uncovering important information about the region’s ancient inhabitants. Due to their exceptional preservation, textiles can provide significant insights into the lives and identities of the individuals buried at the site. While studies have been conducted in the past to address how socioeconomic status and religious affiliation are reflected in textiles, more remains to be learned about how foreign connections and trade affected textile production in the Fayoum region. This research aims to utilize both technical and design analysis to identify foreign textiles—including analyzing weaving techniques, thread manipulations, and woven motifs. It will also aim to use these forms of analyses to detect potential indications of immigration, providing a foundation for future research into connections between immigrant status and funerary practices.

Conserving a keystone predator in the Americas: integrating phylogenomics, biogeography, and species-level taxonomy for a widespread army ant genus

March 21, 2024 12:00 AM
Authors: Megan DuVal, John Longino, Rodolfo da Silva Probst. Mentors: John Longino. Insitution: University of Utah. Army ants (Formicidae: Dorylinae) are top predators throughout most tropical and subtropical regions of the world. Their nomadic colonies and cooperative social hunting make them behaviorally and ecologically unique keystone species that are of conservation concern. Their status as nomadic top predators makes army ants vulnerable in areas affected by habitat fragmentation. An obstacle to conservation efforts is the outdated army ant species-level taxonomy, which hasn’t been updated since the 1950s for many genera. For Labidus, a widespread and ecologically important army ant genus in the Americas, there are currently seven valid species recognized solely based on morphology of workers and/or males. Three species are only based on males, which need to be associated with their respective workers, and within the four primarily worker-based species, there are likely cryptic species. To address these issues, we applied cutting-edge phylogenetics and phylogenomics to update the species-level taxonomy. To construct our phylogenetic tree, we used ultraconserved elements (UCEs, which use thousands of regions across the genome and can accurately infer evolutionary relationships across broad timescales) from 17 specimens, 66 COI barcodes from the Barcode of Life Database (BOLD), and 35 new COI barcodes obtained through in-house Nanopore sequencing. Through our analyses, we found that the genus Labidus contains at least 11 species and that all of the previously recognized wide-ranging species are made up of multiple cryptic species with more restricted ranges. We were able to associate all three previously identified male-based species with their respective workers. We have also found patterns of parallel and overlapping biogeography across multiple Labidus clades. Our UCE+Nanopore approach allows for an updated taxonomy of Labidus, leading to a better understanding of its evolutionary history and a better ability to promote its conservation.

Income Inequality for Women in the Psychology Field

March 21, 2024 12:00 AM
Authors: Jacob Willoughby. Mentors: Joshua Price. Insitution: Southern Utah University. Gender pay inequality remains a persistent and widely discussed issue across various professions and industries. I was curious about the extent that this issue affects the field of psychology as it is an industry that is quite significantly dominated by woman. This econometrics paper delves into the complex landscape of possible gender-based wage disparities within the realm of psychology. By employing rigorous statistical analysis and econometric techniques, I aim to uncover the underlying factors contributing to the pay gap between male and female psychologists. Understanding the intricacies of this phenomenon is not only essential for promoting fairness and equality in the workplace but also for fostering a more inclusive and diverse community within the field of psychology. This study endeavors to shed light on the extent of the pay gap, its determinants, and potential policy implications to address this critical issue in the profession.

A Place for the Arts: Creating Spaces for Cross-Community Contact in Belfast

March 21, 2024 12:00 AM
Authors: Addie Ressler. Mentors: Jacob R. Hickman. Insitution: Brigham Young University. Since the conflict named “the Troubles”, infrastructure and symbolic imagery have been used to divide areas within Northern Ireland and mark territory between Loyalist and Republican communities. While the larger community in Belfast is still held by these physically and socially enforced boundaries, the art community actively defies these restrictive borders by renting, renovating, and then transforming buildings and spaces within segregated areas. In this paper, I analyze the unique and incomparable role that artists can play in pushing against the sectarian attitudes that persist within Belfast. Their success is dependent, in part, on the spaces they occupy and the use of those spaces. I argue that because artists infuse their studios and buildings with metaphysical meaning, artist collectives are able to provide neutral spaces where individuals from the opposing communities can come in contact with one another. Ultimately, members of the art community in Belfast strive to produce a commune-like entity that can act as a microcosm for an ideal Belfast.

Fremont Red-on-Gray Pottery

March 21, 2024 12:00 AM
Authors: Talia Berglund. Mentors: Michael T. Searcy. Insitution: Brigham Young University. Fremont Red-on-Gray Pottery Specific to the Northern Macro-Region of inhabitance, there has yet to be a comprehensive cataloging of Fremont red-on-gray ceramics. As such, I will be asking the following research questions in regard to this type of ceramic: What designs were painted on Great Salt Lake red-on-gray? And how do these designs compare to other Fremont ceramic types? In order to effectively answer these questions, I will look at Great Salt Lake Fremont ceramic vessels and sherds with traces of red paint on the surface, with a particular emphasis on the artifacts found at Hinckley mounds but comparing them to Wolf Village specimens as well. The research will include recording the shapes and designs that are painted on the vessels, as well as measuring width and length of these lines and shapes. I will also investigate what the red pigment is made out of–using either PXRF or microscopic analysis. These methods will generate a catalog of designs found on red-on-gray ceramics, as well as a data set that will allow me to look for patterns among the painted designs. I plan to develop a general typology of red-on-gray Fremont pottery based on the sample investigated.In carrying out this research, we should be able to assess whether or not the Fremont in the Northern Macro-Region shared painting practices with other Fremont in different areas, and thus possibly determine how they viewed themselves as belonging to or different from other nearby groups of people. If a pattern emerges and red-on-gray designs are shared between groups, then perhaps they interacted with and associated with those groups. If there is a lack of shared practices and designs, the opposite could be potentially true.

Faunal Remains from Hinckley Mounds

March 21, 2024 12:00 AM
Authors: Amber Clayton. Mentors: Michael Searcy. Insitution: Brigham Young University. This summer, an excavation took place at the Hinckley Mounds, which included the recovery of many different artifacts. Artifacts found include faunal bones—the main object of my research project. The Fremont people left behind so many different things for us to find. They hunted particular animals; which can indicate which animals may have contributed most to their diets and may have also been used to contribute to other aspects of their lives. Many questions can be answered with the analysis of faunal bones: Which faunal bones show up more than others? What does the variety of animals teach us about the Fremont people at Hinckley Mounds? Through the analysis of the faunal assemblage I will be conducting, I will be able to tell which animals are more common in the assemblage. I believe this will also be able to tell me which animals played a more prominent part in the lives of the Fremont people.My primary goal is to determine the typology of the faunal bones by using the comparative collection at the Museum of Peoples and Cultures in order to see if I can identify the animals left behind by the Fremont people at Hinckley Mounds. Hundreds of faunal bones were found, so many of them that it will be impossible for me to analyze all of them during fall semester. However, I will strive to analyze representative sample of them so I have some good sample data. I will then use the data from 2023 and the results from the 2015 field season to write up the research for this project.

What role does gig work play in bridging or widening the gender pay gap among underrepresented groups?

March 21, 2024 12:00 AM
Authors: Katrina Kim. Mentors: Joshua Price. Insitution: Southern Utah University. The gender wage gap has been a persistent issue in the labor market for several decades, resulting in inequalities in workforce opportunities for women. Traditionally, this gap has often been attributed to observable characteristics, referred to as "human capital determinants" which characterized jobs in to male-dominated and female-dominated roles. This division was based on factors such as job requirements and physical labor, leading to disparities in wages. However, recent decades have seen a narrowing of the gender wage gap due to increased opportunities and the emergence of the gig economy. While Uber is one of the most widely recognized gig economy platforms, this study aims to explore whether the gender wage gap persists or narrows across various technology-based job markets. Utilizing data from the Gig Economy Data Hub, which includes information from gig worker surveys, tax returns, demographics, and more, this research seeks to identify the factors influencing gender pay disparities. The study will examine income differentials between male and female gig workers across multiple platforms, taking into account various wage determinants and tax statuses. Additionally, demographic variables including race and household income will be considered as wage disparities exist not only between genders but also among different minority groups. By examining various factors, this study will contribute to a more comprehensive understanding of the impact of the gig economy on gender pay equity and inform potential policy interventions aimed at addressing these disparities.

The Transmission of National Identity: A Case Study of Japan's Memorialization of the Past

March 21, 2024 12:00 AM
Authors: Ashlyn Clark. Mentors: Lynnette Finau. Insitution: Brigham Young University. Festivals, museums, bookstores, and Shinto shrines might not seem to have a lot in common, but implicit Nationalist ideals find their way into each of these, leaving their mark in the transmission of Japanese identity. In this study of Yasukuni Jinja and the Yushukan Museum (the Tokyo National War and Peace Memorial shrine and museum), it becomes more clear how these relate to one another, how they relate to Japanese identity, and how exactly they are nationalist in nature. Honor, sacrifice, tradition, and war come together to create a beautiful, unifying narrative that links ancestors with descendants, maintaining national identity and continuing to transmit their traditional ideals.

Seasonal Effects on Drosophila Development Rates

March 21, 2024 12:00 AM
Authors: Peyton Jackson. Mentors: John Chaston. Insitution: Brigham Young University. This study explores the relationship between seasonal variations and the development rates of Drosophila Melanogaster. Flies are closely monitored in a controlled laboratory setting after being transferred from outdoor cages across different seasons. In the outdoor cages, the introduction of the bacterial strain A. orientalis DmW_045, commonly referred to as '45,' enhances development rates and ensures consistent data collection. Axenic flies, created by thoroughly sterilizing fly eggs with bleach to eliminate external bacteria, are employed to isolate genetic influences on the relationship between season and development rates. The core methodology involves two groups: axenic flies treated with '45' and a control group unexposed to '45.' This approach guarantees data accuracy and assesses development rates based purely on genetics. Development rates are measured by marking eclosed (hatched) pupae on vials at specific intervals. The research seeks to unveil the correlation between seasonal variations and fly development rates, shedding light on the role of seasonal factors in shaping development. This study explores the interplay between seasonal variations and Drosophila fly development, emphasizing genetics and environmental factors. Its potential significance lies in providing insights beneficial for ecological and genetic studies, potentially offering a clear genetic link between seasons and development rates that can enhance our understanding of the natural world.

A Study of Polymer Bonding and the Restoration of Fragmented Ancient Pottery

March 21, 2024 12:00 AM
Authors: Ellie Martin. Mentors: Cynthia Finlayson. Insitution: Brigham Young University. Pottery reconstruction allows archaeologists to better understand their artifacts and gain a more complete understanding of ancient ceramic techniques. Reconstruction techniques have evolved over time that strive for both better conservation practices and long-lasting results, as well as the use of bonding materials that are reversible rather than permanent. This poster examines the process of utilizing an acetone-based glue consisting of dissolved polymer beads of differing strength solutions. The entire process with be illustrated by step-by-step photos and directions as well as the quality of the final results. Two layers of different solution consistencies are applied to the pottery in different stages before the pieces are joined together. The first layer of glue is a thin coat made of 5% polymer and 95% acetone, and it is applied to any edges that will be refit. This layer fortifies the sherd and ensures that the glue applied is not stronger than the sherd itself. After the first layer has dried, the second coat of glue, made of 12% polymer and 88% acetone, is added to each piece. The sherds are then joined and placed in a secure location to dry, such as a bin of silica beads. Acetone-based polymer glue is strong and flexible, yet also dissolvable. Any mistakes can be unmade with the careful application of small amounts of acetone, and no restoration action is utilized on the pottery fragments that cannot be undone. This method of reconstruction is safe, secure, long-lasting, and meets modern conservation standards.

Designing Inducible DNA Constructs for the Chicken

March 21, 2024 12:00 AM
Authors: Lant Jenkins, Dalyn Davis, Caleb Kratt. Mentors: Jeffery Barrow. Insitution: Brigham Young University. Currently, nematodes, fruit flies, and zebrafish are effective models for gene manipulation due to their rapid embryonic development and capacity for producing a large number of offspring. Avians such as the chicken have also served as embryonic models and have proven to be powerful tools for exploring developmental processes such as neural tube or limb development. Because of high chick fecundity, a relatively short period of development, and the accessibility of the chick embryo, the chicken would make an excellent model for gene manipulation that would significantly enhance our study of the relationship between genes and phenotypes in vertebrates. The aim of our research is to develop a line of genetically modified chicken germ cells into which new DNA vectors can be seamlessly introduced via cassette exchange. The design of the germ cells is such that the DNA vectors will be incorporated into the chicken genome at specified safe harbor locations, areas of euchromatin where the introduced DNA will not interfere with other genes. These modified germ cells can then be injected into chicken embryos and contribute to the chick’s germline. We anticipate that this model for modifying the chicken’s genome will significantly enhance our ability to introduce new DNA vectors, making the chicken a more desirable model for studying embryonic development via genetic manipulation.

Antihistamines Blunt the Effect of Localized Vibration on Arterial blood Flow

March 21, 2024 12:00 AM
Authors: Dustin Edmonds, Devin Needs, Riley Fisher. Mentors: Brent Feland. Insitution: Brigham Young University. Research questionHow does localized vibration increase blood flow? We know that localized vibrations increase blood flow. We wanted to know if this is done through the release of hormones, specifically histamines. Relevant research contextResearch on blood flow has been done using whole-body vibration but research on the effects of localized vibration on arterial blood flow is scant. To date, there are only a couple of research articles on massage guns despite their prolific use in the sports industry. No research to date has attempted to assess the mechanism behind the increased blood flow that results from localized vibration.MethodsTwenty-one participants completed this study, 11 males and 10 females, mean age of 22.1 +/- 2.0 years. The mean male height 181.3 +/- 9.6 cm and weight 80.7 +/- 19.0 kg. The mean female height is 169.2 +/- 7.5 cm, and the mean weight is 64.5 +/- 9.3 kg. All subjects were “recreationally active” and exercised at least three times a week for thirty minutes a day. Excessive activity or high-level athletes were not allowed to participate. Each subject received localized vibration to the gastrocnemius (vibration of 47 Hz for 10 minutes) with and without an antihistamine drug by reporting to the lab on 2 separate days. The non-antihistamine trial was performed first, followed at least 24 hours later by ingesting an antihistamine (180 mg of fexofenadine) 1 hour before the trial. Blood flow in the popliteal artery was measured using an ultrasound. Measurements (mean and peak blood velocity, volume flow, popliteal diameter, and heart rate) were taken before localized vibration treatment and then taken at intervals for 19 minutes after the treatment.AnalysisWe used a cell-means mixed model to statistically compare the effect of vibration on blood flow with and without antihistamines. This was done by evaluating the blood flow response immediately post vibration and comparing that to baseline values for both control and antihistamine conditions. Results and ConclusionThere was a significant increase in blood flow without antihistamine while administration of antihistamine blunted the blood flow response and resulted in an insignificant increase in blood flow. In the tests with the antihistamine, we saw an insignificant change in blood flow immediately post vibration, resulting from the localized vibration. From this experiment, we hypothesize that increased blood flow from localized vibration is due to activation of mast cells which release histamines and that this cellular activation is force dependent.

Fish Tattoos: The Evolutionary Cost of Black Spot Disease

March 21, 2024 12:00 AM
Authors: Eric Morris. Mentors: Jerry Johnson. Insitution: Brigham Young University. Black Spot Disease (BSD) is a parasitic infection that occurs when trematode parasites burrow into the skin of a fish and form a cyst. The infected fish releases black pigment around the cyst creating a visible black spot. Fishes can have different levels of infection ranging from a few cysts located on their skin to an entire body speckled with these markings. Parasitic diseases typically come with a cost to the host species. Little research has been conducted examining the cost of such diseases in the placental live-bearing fish Brachyrhaphis rhabdophora. My study examines the influence of BSD on female association preferences by providing female Brachyrhaphis rhabdophora dichotomous choices between males who appear to be healthy, slightly infected, moderately infected, and highly infected. The different levels of infection in the males are simulated by ink tattooing.

Gene analysis of gut microbiota that improves chill coma recovery rates in Drosophila Melanogaster

March 21, 2024 12:00 AM
Authors: Lauren Heath, John Chaston. Mentors: John Chaston. Insitution: Brigham Young University. Mounting evidence shows that gut microbiota disruption is related to several physiological processes and disease development in mammals; however, the mechanisms by which these processes take place are not fully understood due to the complexity of the mammalian gut microbiome. Studying the fruit fly, Drosophila Melanogaster proves to be a valuable model for understanding the gut microbiome on a smaller scale. Previous research has identified microbiota disruption alters the fly’s ability to cope with thermal stress and causes slower chill coma recovery times. Chill coma recovery is an important survival trait and stress response in Drosophila flies. Microbiota may affect the ability of hosts to tolerate stressful situations. The purpose of this project is to determine the effect of different bacterial strains on the mechanisms of chill coma recovery through a metagenome analysis of different bacterial strains. I hypothesize that certain microbe genes will increase chill coma recovery times. To test this assumption, I will mono-associate by flooding different groups of eggs with a microbe wash and infusing their food with the same bacteria strain. After cultivation, a chill coma will be induced by placing mature adult flies in empty vials on ice for three hours, and then the time for each individual to stand up after their transfer to room temperature will be recorded. Subsequently, I will assess cold tolerance, and evaluate the rates of recovery. With this, we can further identify the mechanisms of the chill coma recovery process by pinpointing specific proteins necessary for this process through a metagenome-wide association approach (MGWA) and gene analysis. If I observe no effect of the bacterial strains on chill coma recovery times, I can test different mixes of microbes to determine if improved recovery rates are a side effect of global metabolic changes caused by decreased biodiversity in the gut of drosophila flies. Studying the metabolic processes of Drosophila allows us to unravel further the mechanisms by which gut microbes affect the fitness and health of their host. My findings may be extrapolated to further understand the human gut microbiome.

ATP and Dopamine Co-Release in the NAc

March 21, 2024 12:00 AM
Authors: Jonathan Dickerson, Christian Ahrens, Zach Valentine, Sara Linderman, Hillary Wadsworth, Lauren Ford, Jordan Yorgason. Mentors: Jordan Yorgason. Insitution: Brigham Young University. The nucleus accumbens (NAc) is a major component of the reward pathway in the brain. The role of ATP as a neurotransmitter within the NAc has largely remained unstudied. Multiple experiments have hinted at larger roles ATP may have in other areas of the brain, but not yet in the NAc to our knowledge. Our goal was to characterize ATP release in the NAc, in an attempt to pave the way to finding novel methods for treating/preventing addiction. Fast-scan cyclic voltammetry (FSCV) was used to track ATP and dopamine release in the NAc of mouse brains, evoked with electrical stimulations before and after application of various drugs. Blocking nAChR’s and NaV channels reduced both ATP and dopamine release. Blocking DAT’s enhanced release, but blocked clearance of both ATP and dopamine, and activating the immune system with LPS increased release of both ATP and dopamine. Changes in dopamine and ATP release after drug application were definitely correlated, but not proportionally so. While in some instances, the same mechanisms previously thought to work just with one neurotransmitter or the other had effects on both, changes in ATP signaling cannot be fully explained by dopaminergic machinery in the NAc.

Keystone Species in an Urban Environment: Do Raptors Control the Mexican Gray Squirrel in Mexico City?

March 21, 2024 12:00 AM
Authors: Byron Adams, Elias Johnson, D Alejandro Espinosa-Lucas, R Darío Perez-García, Israel Solano-Zavaleta, J Jaime Zúñiga-Vega, Gonzalo A Ramirez-Cruz. Mentors: Byron Adams. Insitution: Brigham Young University. Urbanization has forced animals to respond to novel environments. One of the challenges of urban ecology is that it is unknown if the ecological processes that take place in wild conditions also occur in urban environments. In natural ecosystems, key predators can limit prey abundance and have a widespread effect on trophic levels. Here, we examine a predator-prey interaction in Mexico City, an urban ecosystem where prey can be evaluated in the presence or absence of apex predators. Nearly all original ecosystems in Mexico City have been converted into man-made structures. Many of the green spaces in the city contain populations of the Mexican gray squirrel. These green spaces are also inhabited by different species of raptors, the most frequent being Harris’s hawk, Cooper’s hawk, and sharp-shinned hawk. Little is known about interactions between raptors and squirrels in terms of demographic parameters. We do know, however, that raptors prey on squirrels. We predicted that in parks where raptors were present, there would be fewer squirrels than in parks where there were no raptors. We studied the relationship between raptors and squirrels using occupancy models to determine the environmental factors that affect the presence of both squirrels and raptors. We then tested if the presence of raptors influenced the occupancy probability of squirrels. Lastly, we estimated the abundance of squirrels in parks, both where raptors are present and where they are absent. Contrary to our predictions, we found no evidence that predators predict squirrel abundance. However, we did find evidence that the presence of raptors can be predicted by the abundance of squirrels. These results suggest that this predator-prey interaction in Mexico City parks could be relatively recent and still not in equilibrium, or that other factors may be affecting the dynamics between these two urban populations.

Red Alert! Deciphering Seasonal Color Patterns in Utah Dragonflies and Damselflies

March 21, 2024 12:00 AM
Authors: Eva Driggs, Megan Cahoon, Seth Bybee. Mentors: Seth Bybee. Insitution: Brigham Young University. Odonates (dragonflies and damselflies) exhibit diverse coloration. These vibrant colors are important for species recognition, camouflage, and mate recognition. Adult odonates emerge in late spring, mate and reproduce, and die by fall. As color and seasonality are both important aspects of the adult stage in odonates, we pose the question: Does the odonate community color composition change over the season?We hypothesize that different colors within the odonate community will peak in abundance at different times in the season. We conducted population estimates weekly at a local park in Provo and analyzed data from Utah, the Great Basin, and the West Coast (GBIF). From this data, we found that generally, blue odonates have the highest abundance throughout the season, but red odonate populations persist later in the season while blue populations decline which may be due to seasonal changes in heat and light.

Do Predators Cause Maternal Effects in Livebearing Tropical Fish?

March 21, 2024 12:00 AM
Authors: Nolan Rodeback, Jerald Johnson. Mentors: Jerald Johnson. Insitution: Brigham Young University. The environment plays a crucial role in the development and evolution of organisms. In some cases, the environmental pressures on a mother may result in changes of offspring phenotypes. This phenomenon, called maternal effects, might occur in the tropic fish species Brachyrhaphis rhabdophora. I will conduct an experiment to test if maternal effects can be induced by the presence of a predator. To measure this we will look at maturity age and growth rates in the offspring where mothers are reared in the presence or absence of predators. If predators have an effect, offspring should mature at earlier ages and have faster growth rates than individuals with mothers reared in the absence of predators.

CICNT surfaces block Staphylococcus aureus biofilm formation on implanted devices in mice

March 21, 2024 12:00 AM
Authors: Brooklyn Jones. Mentors: Bradford Berges. Insitution: Brigham Young University. Staphylococcus aureus (SA) forms biofilms that cause considerable morbidity and mortality in patients who receive implanted devices such as prosthetics or fixator pins. An ideal surface for such medical devices would inhibit biofilm growth. Recently, it was reported that surface modification of stainless-steel materials with carbon-infiltrated carbon nanotubes (CICNT) inhibits the growth of SA biofilms. Through previous research, we investigated this antimicrobial effect on titanium (Ti) materials with CICNT coated surfaces in a variety of surface morphologies and across a broader spectrum of SA isolates. We have in vitro evidence that carbon nanotube-treated materials are effective at preventing SA biofilm formation on Ti, the most common material used in human implanted devices. We now wish to study the effects of carbon nanotube treatments on prevention of SA biofilm formation in vivo which has potential value to improving human health .

Epigenetic Marks of Antiaging Pioglitazone Hydrochloride (PGZ) on Progeny

March 21, 2024 12:00 AM
Authors: Wesley Hendricks. Mentors: Steve Johnson. Insitution: Brigham Young University. Pioglitazone Hydrochloride (PGZ) is a well-accepted treatment of type-II diabetes and has been shown in previous studies to increase lifespan of C. elegans. The agonist has been shown to affect the insulin, IGF-1 signaling pathway (IIS), dietary restriction (DR) and germline signaling pathways. Previous studies have not been able to identify epigenetic marks that are a result of the pathway effects of PGZ (Jia Wenguan et. al). This study seeks to understand how subsequent generations are affected by antiaging compounds and what epigenetic marks are transmitted through the germline of C. elegans from these three pathways. After exposure, through lifespan tracking, we hope to see a change in transgenerational longevity. Using RNAi, we then plan to knockout known genes in each pathway. We hope to see that intestine-germline pathway and maintenance genes that are known to function in each pathway are required for the longevity effect.

Natural Transformation in Staphylococcus aureus biofilms

March 21, 2024 12:00 AM
Authors: Julia Gilpin, Lucy Bowden, Sela Harris, Elisa McRae, Jenny Bean, Brooklyn Jones. Mentors: Bradford Berges. Insitution: Brigham Young University. Staphylococcus aureus (SA) is a significant human pathogen that has acquired antibiotic resistance, posing a global health threat. This bacterium is prevalent in livestock, raw meat, and healthcare settings, leading to infections ranging from mild to life-threatening. The emergence of multi-drug resistant strains, such as Methicillin-Resistant Staphylococcus aureus (MRSA), further complicates treatment. The mechanisms of antibiotic resistance transfer, especially within biofilms, remain poorly understood.This research aims to investigate horizontal gene transfer within biofilms of SA isolated from humans. Leveraging the work of the Berges laboratory and techniques used by other researchers. The experimental design involves the use of heat-killed cells as donors to prevent conjugation, shedding light on how biofilm structure influences transformation efficiency.To address the hypothesis that biofilms serve as hotspots for horizontal gene transfer, the research employs a two-component system for upregulating natural competence genes in SA under biofilm growth conditions. This approach will allow us to detect natural transformation, advancing our understanding of SA infections closely associated with biofilm formation. If successful, this study will provide insights into how SA acquires antibiotic-resistant genes and may lead to the development of preventive measures and treatment strategies to combat drug-resistant strains.

The Effects of Latitude and Other Microbiota on the Microbiota of Drosophila Melanogaster

March 21, 2024 12:00 AM
Authors: Connor Hough. Mentors: Johnny Chaston. Insitution: Brigham Young University. Many variables can have an effect on the microbiota (microbial community associated with an organism) which can, in turn, affect the health and lifestyle of the microbiota's host organism. One such variable is geographic latitude (distance away from the earth's equator) which was the subject of a portion of a study performed by Walters et al. in 2020 and a similar study performed by Henry et al. in 2022. Walters et al. determined that latitude had a significant effect on the composition of the gut microbiota in Drosophila melanogaster (fruit flies) while Henry et al. determined that latitude did not have a significant effect. To better understand what variables may have caused a difference in the results of these two studies I plan to perform data analysis on the data provided from both Walters et al. and Henry et al. Particularly, Henry et al. provided data about the microbiota of other sample types associated with D. melanogaster across the latitudinal cline such as the fruit fly excrement, the leaves in their environment, and their diet which consisted of apples and grapes. While this data was mentioned in Henry et al.’s paper I feel that a more in depth analysis of these sample types could bring insight about how these microbiota affect one another and how latitude affects each of them separately. I will use QIIME (a bioinformatics data analysis software) data analysis methods, such as alpha and beta diversity metrics, and R to analyze the data provided and create graphs. Because each sample type in the data was recorded with unequal sample sizes I will also need to make a new taxonomic graph of the sample types when measured proportionally to each other. To do this I will use QIIME to group the original feature table metadata from Henry et al. by sample type and return a new table with an equal number of samples for each sample type. With this done I will then be able to make a new bar plot using QIIME. I will then use this new set of adjusted data to analyze the relationships between latitude and each sample type as well as the relationship between each sample type to one another. I will also perform these data analytics methods on the data provided on fruit fly gut microbiota by Walters et al. and compare the results with the fruit fly gut microbiota provided by Henry et al.. I hypothesize that further analyzing the data from these sample types will reveal new correlations between the microbiota of these sample types and with latitude. If no new information is learned through this analysis then it will solidify Henry et al.’s claim that latitude does not significantly affect the microbiota. Alternative outcomes may show that there is not a correlation between the microbiota of sample types which would indicate that the microbiota exhibits a neutral behavior and is not selective. However, if my hypothesis is correct then these correlations would show that the microbiota of separate sample types are related to the microbiota of other sample types and that latitude does have a significant effect on the microbiota of each sample type. The results of this analysis will open up more pathways for study about the reason behind these correlations or the lack thereof.

Evaluating the role of LRRC1 in melanoma growth and metastasis

March 21, 2024 12:00 AM
Authors: Kylee Fernandez. Mentors: Gennie L Parkman. Insitution: University of Utah. Evaluating the role of LRRC1 in melanoma growth and metastasisThe development of brain metastases is a critical problem in Utah, regardless of the novel therapies created for melanoma. The melanoma mortality rates in Utah are 31% higher than the national average and the melanoma incidences are 80% higher. To lower these incidences, our research is aimed at investigating targets in melanoma that play a crucial role in brain metastasis and can be identified as therapeutic interventions.LRRC1 is a gene known as Leucine Rich Repeat Containing 1. LRRC1 is involved in early-stage adipocytic differentiation. Altered gene and protein expression of LRRC1 is observed in melanoma potentially due to the vital role LRRC1 plays in adipose stem cells that differentiate by adopting the phenotypic, biochemical, and functional properties of more terminally differentiated cells. To evaluate the effect of LRRC1 on melanoma growth and metastasis, we are using an established autochthonous in vitro and in vivo model of melanoma based on the RCAS/TVA avian retroviral system. The results of this study will have tremendous potential to contribute to the understanding of the genetics of this heterogeneous disease.

Bx42 is Required for Brain Development and is Linked to Microcephaly

March 21, 2024 12:00 AM
Authors: Adriana Bibo, Nicole Losurdo, Nichole Link. Mentors: Nichole Link, Cindy Greaves. Insitution: University of Utah. Microcephaly is a neurodevelopmental disorder characterized by occipital frontal circumference (OFC) more than two standard deviations below the mean. It can be accompanied by comorbidities including intellectual disabilities, seizures, and other developmental phenotypes. Microcephaly is attributed to malnutrition and exposure to toxins or infection during pregnancy, but genetic mutations are also a leading cause. To investigate the genetic mechanisms behind microcephaly, our lab collaborates with a physician who has completed whole exome sequencing for two hundred microcephaly patients. He identified potentially pathogenic human variants, which we are studying using Drosophila melanogaster as our model organism. We screened for loss of function phenotypes through RNAi knockdown of fly orthologs to determine if these genes are necessary for brain development. In our primary screen, we found that RNAi knockdown of Bx42 in neural stem cells or post-mitotic neurons causes significantly reduced brain lobe volume. In our current study, we are assessing potential causes for reduced brain lobe volume. We seek to determine if RNAi knockdown of Bx42 in neural stem cells or neurons affects cell number, proliferation, or death in developing brains.

Using Technician Statistics For Productive Animal Care

March 21, 2024 12:00 AM
Authors: Grace Moore. Mentors: Aaron Olsen. Insitution: Utah State University. AbstractAnimal care technicians for research labs have many responsibilities in order to maintain the integrity of a research project. However, it is difficult to determine what tasks will require most of a technician’s time and effort. Thus, it is proposed that tracking what each individual does during a given shift can allow supervisors and technicians to create an efficient schedule of how they will work and provide a standard for individuals to meet every day. This project consists of tracking in detail what an animal care technician does in a given “shift”, including observation hours, handling and restraining, working in different biosafety levels, cleaning and prepping caging, and changing the caging. This data collection, over several months of work, finds relationships between tasks, the frequencies of being completed, and the time they take. The key tasks of an animal care technician are observing, providing nourishment, maintaining clean environments for both the researchers and the subjects, and maintaining supplies and accurate records. Additionally, many hours are dedicated solely to observing the animals to ensure their health and safety. Moreover, cleaning and prepping of caging or supplies are completed more than half of the time during a given shift. Finally, working with a given species may require more time to complete a task (such as cage changing or cage preparation) compared to another species despite the task being the same. If each technician were to track their tasks and create a profile of personal statistics, they would be able to easily determine how long a task should take. Moreover, a supervisor would be able to determine if a technician is working more efficiently or even falling behind during daily tasks. Overall, these findings could be used to incorporate better time management or planning for institutions to know what more time or resources may need to be devoted to in order to maintain a safe environment, provide exceptional care for the subjects, and follow every protocol.

In the Depths of the Understory: Costa Rican Associations Between Ants and Coccoidea Unraveled using NGS DNA Barcoding

March 21, 2024 12:00 AM
Authors: Sylvia Lee, Ainsley Parkins, Rodolfo S Probst. Mentors: Rodolfo S Probst. Insitution: University of Utah. Mutualisms between ants and plants are ubiquitous interactions and have been evolving for over 100 million years. Studies have been done on systems wherein the plants provide nutritional resources for ants, but the dynamics of mutualistic interactions in environments where host plants do not provide obvious nutritional rewards continue to remain elusive, raising questions about their co-evolutionary histories. In these circumstances, associated fauna, such as mealybugs and soft scales (Hemiptera: Coccoidea: Pseudococcidae and Coccidae), serve as intermediaries of the association, providing honeydew (enhanced plant sap) as a main food source to their host ants. However, the identity of the insects involved in these associations and their co-evolutionary history with ants is poorly understood. By focusing on samples collected in Costa Rica from 33 colonies of the Neotropical plant-ant genus Myrmelachista (Formicinae: Myrmelachistini), we sequenced DNA barcodes (cytochrome oxidase subunit 1 [CO1]) using Oxford Nanopore Technology and employed Next-Generation Sequencing (NGS) for both the Myrmelachista ants and their associated fauna. We aimed to identify their taxonomy, phylogenetic relationships and identify unique interactions between ants and their associated fauna. We recovered DNA barcodes for eleven Myrmelachista species and seven putative species of mealybugs (n=5) and soft scales (n=2). For the seven putative species of Coccoidea, our DNA barcodes, when compared to available sequences from the NCBI database, recovered an average of 85% match similarity. The closest matches associated our putative species to Old World Coccoidea taxa, reinforcing the need for taxonomic studies of this superfamily for the Neotropical region. Each putative species of soft scales was found uniquely associated with two Myrmelachista species (M. flavoguarea and M. cooperi). For all eleven Myrmelachista species, five were associated with two putative mealybug species. One putative mealybug species was associated with five different Myrmelachista species; one was uniquely associated with M. nigrocotea. Same associations were found between the associated fauna of M. flavocotea and M. lauropacifica; M. haberi and M. RSP027; M. plebecula, M. meganaranja, and M. osa, respectively. These results suggest that there may be unique associations between some Myrmelachista species and their Coccoidea associates, unconstrained by the ant phylogeny. Our findings also provide insights on Coccoidea taxonomy, emphasizing NGS DNA barcoding as a tool to illuminate how ant-plant associations might have evolved.

Unveiling Cryptic Avifauna Diversity Using Nanopore DNA Sequencing: A Case Study in the Passerine Genus Emberiza

March 21, 2024 12:00 AM
Authors: Ainsley E Parkins, Sylvia Lee, Elizabeth J Heath, Thomas Petitjean, Kyle Cink, Kyle Kittelberger, Cagan Sekercioglou, Rodolfo S Probst. Mentors: Rodolfo S Probst. Insitution: University of Utah. Biodiversity loss poses a significant threat, requiring accurate species assessment and conservation strategies. Non-invasive and cost-effective techniques should be prioritized, especially when dealing with threatened vertebrate fauna. By focusing on cryptic Eastern European species within the genus Emberiza (Passeriformes: Emberizidae), we designed an affordable molecular pipeline (including DNA primers and bioinformatics) integrating DNA barcoding with Nanopore sequencing to address species boundaries and provide conservation information for avifauna diversity. We conducted non-invasive DNA extractions from individual feathers of 192 specimens collected in the Aras River Riparian Corridor (ARRC), an important ecological hotspot in Turkey. By targeting the cytochrome oxidase subunit I (CO1) region, our goal was to differentiate Emberiza taxa and identify potential cryptic lineages while using cutting-edge next-generation sequencing (NGS) of multiplexed specimens with portable Oxford Nanopore Technologies. Our focal study examined boundaries in Emberiza subspecies (E. shoeniclus shoeniclus and E. shoeniclus caspia) with subtle morphological differences, utilizing DNA barcoding and Nanopore sequencing. We obtained 182 Emberiza DNA barcodes. Clustering analysis recovered a paraphyletic assemblage (n=32) and a clade, the latter recovering majority of the barcodes (n=150), separated by at least 8% genetic difference. In both cases, we observed a mixture of barcodes from the nominal subspecies and Caspian subspecies, suggesting that cryptic morphological characteristics are not reflected in genetic separation. Our results also suggest putative cryptic Emberiza species, highlighting the importance of the ARRC for conserving avian diversity. We demonstrate that our pipeline, integrating real-time Nanopore sequencing with non-invasive DNA barcoding, can be used for conservation initiatives (particularly aiding cryptic species identification). This study expands our knowledge of avian diversity and highlights the potential of NGS DNA barcodes as a powerful tool for aiding conservation efforts amidst biodiversity loss.

Murine Model of Hepatitis Delta Virus-Associated Salivary Gland Impairment

March 21, 2024 12:00 AM
Authors: Alexander Romano, Matthew Hesterman, Rachel Hill, Melodie Weller. Mentors: Melodie Weller. Insitution: University of Utah. Sjogren’s Disease (SjD) is an autoimmune disease diagnosed by symptoms of reduced tear and saliva excretion, accumulation of lymphocyte foci in the salivary glands, and the occurrence of antibodies against Ro (SSA), La (SSB), and nuclear proteins. The cause of SjD is unknown, though previous studies have detected the sequence and antigens of Hepatitis Delta Virus (HDV) in the minor salivary gland acinar, ductal, and adipose cells of patients with SjD; without the typical presence of a Hepatitis B coinfection. In this study, murine models were transduced with Adeno-associated virus containing expression cassettes for Luciferase (control), small, large, or a combination of both small and large HDV antigens to evaluate the impact of HDV antigen expression on salivary gland function and SjD autoimmune disease development. After a ten- or four-month period, the models were analyzed. Findings included a significant increase of inflammation for samples expressing both small and large HDV antigens, a significant increase of anti-SSA(La) antibodies in samples expressing the short HDV antigen, and a correlation between increased overall inflammation and decreased overall saliva flow. Performing qPCR methods verified the amount of HDV in the submandibular glands and Illumina sequencing portrayed an increase in glycolysis and beta oxidation metabolism in models with detectible HDV sequence. The models showed significantly increased IgM expression in the HDV exposed murine models, without significant change of other antibodies. Future plans include an ELISA diagnostic assay to verify the antibody levels and further sequencing analysis. With this information we can build a better picture of the direct mechanisms of HDV-mediated changes in salivary gland dysfunction and determine the extent that HDV can inducing systemic SjD symptoms.

Optimization of Subcritical Water Hydrolysis of Microalgae Biomass for Clean Meat Production

March 21, 2024 12:00 AM
Authors: Bradley Lawson, Lukas Keller, Marshall Burrows, Sam Perkins, Emery Wheeler. Mentors: Ronald Sims. Insitution: Utah State University. Subcritical water hydrolysis (SWH) is a developing method of processing organic materials/waste without the use of acids and alkali materials. SWH lyses peptides differently than acid hydrolysis and can produce Maillard products, which have various effects in cell culture. In this study, a batch-mode pressure vessel with a semi-continuous sampling apparatus will be used to optimize temperature and retention time for the hydrolysis of Chlorella vulgaris biomass for the development of serum-free (or low-serum) cell culture media. Hydrolysis will be done at temperatures from 140°C to 300°C and retention times from 5 minutes to 30 minutes. The SWH products will be assessed for their general protein content, lipid content, bioactivity, and carbohydrate content. These efforts will be of use to Upside Foods in its efforts to create sustainable and ethical cultured meat products.

Using Past Ecosystems to Understand Modern Climate Change: A Case Study from Utah’s House Mountain Range

March 21, 2024 12:00 AM
Authors: Jane Damstedt, Kasey Cole. Mentors: Kasey Cole. Insitution: University of Utah. In this project, we are analyzing faunal remains recovered from Utah’s House Mountain Range in the Tubafore cave system to create a paleoecological baseline of life in that location over the past 1000 years. All animals have relatively consistent ecological tolerances and preferences, so comparing the data from the information obtained in this study with contemporary accounts of mammalian ecology in the same area will be useful in evaluating the role of anthropogenic climate change in mammalian ecosystems. In this project, I am identifying the animal remains to the lowest level of taxonomic classification possible to determine what kinds of species richness and environment were present at the time in which the animal was alive. Creating an accurate record of the animals found in this cave assemblage is critical because very little is known about the species richness of the Great Basin area. This data will then be stored and compared to modern zoological data, which came from online databases Actos and Vertnet. The information gathered from this project can be used to inform conservation and sustainability efforts aiming at preserving biodiversity in Central Utah’s Mountain Ranges.

Nonequilibrium Thermodynamics of Voltage-Gated Ion Channels

March 21, 2024 12:00 AM
Authors: Ada Cottam Allen, Mikhael T Semaan. Mentors: Mikhael T Semaan. Insitution: University of Utah. Regularly buoyed from thermodynamic equilibrium by complex and fluctuating environments, living systems must continually respond and adapt to external stimuli. Recent tools from stochastic thermodynamics place concrete energetic and entropic bounds on these processes, for systems arbitrarily far from equilibrium both in and out of steady-state conditions, and thus reveal mechanisms by which these systems absorb and dissipate energy to function. Here, we leverage these tools to simulate and calculate the thermodynamic signatures of several models of sodium and potassium ion channels---channels crucial to propagating action potentials in mammalian neurons---as driven by biologically-realistic action potential spiking protocols. Thus uncovering their detailed energetic responses to such complex environmental conditions, these results enable detailed comparison between the thermodynamic functionality of each channel type with driving one would expect in-vivo. When applied to competing models of the same channel, these tools also provide additional criteria for model selection; to this end, we close by calculating expected ionic currents, directly facilitating comparison with dynamically-driven patch-clamp experiments.

Impact of Inducible Depletion of Sequestosome-1 (p62) From Endothelial Cells On Intrinsic Arterial Stiffness

March 21, 2024 12:00 AM
Authors: G. Colton Gardner, Lynasi Gapelu, Sohom Mookherjee, Sihem Boudina, J. David Symons. Mentors: J. David Symons. Insitution: University of Utah. With the prevalence of cardiovascular disease increasing world wide and its precise mechanisms remaining elusive, the need for novel treatments is urgent. Autophagy is a conserved process whereby dysregulated intracellular proteins are escorted to the lysosome for recycling. Emerging evidence indicates that autophagy is important in maintaining endothelial cell (EC) proteostasis and function. My laboratory showed that autophagy repression in adult mice ECs produces arterial dysfunction, and indexes of autophagy are repressed in ECs of older mice and humans which display concurrent EC dysfunction. Sequestosome 1 (p62) tethers proteins and enables their entry into the autophagic pathway. The contribution from EC p62 to cardiovascular and metabolic function is unknown and experiments are needed to investigate this. Thus, p62 will be depleted from ECs of adult male and female mice (p62iEC-/-) via tamoxifen regimen, and results will be compared to animals wherein EC p62 is intact (CON). The efficacy and specificity of EC p62 depletion will be evaluated in ECs and vascular smooth muscle by qPCR and immunoblotting. Three adjacent 1 mm thoracic aorta sections will be obtained 14 days after the tamoxifen regimen. The central aorta section will be used to measure intrinsic mechanical stiffness by wire myography, with the other two used to find lumen diameter and intimal medial thickness. These measurements will help create Stress vs. Strain curves and the Elastic Modulus, which will be compared between the groups to show the differences caused by p62 depletion. We expect p62 depletion from ECs to increase intrinsic aortic stiffness.

A Metagenomic Analysis the Microbial Composition of Apis mellifera Pollen Preserves throughout the Foraging Season

March 21, 2024 12:00 AM
Authors: Sydney Larsen. Mentors: Joshua Steffen. Insitution: University of Utah. Pollen preserves are crucial to maintaining Apis mellifera’s hive health. This pollen provides bees with a source of protein, amino acids, lipids, and other nutrients that are vital for larvae development (Dharampal et. Al, 2019). In addition to providing these essential nutrients, bee collected pollen also provides the hive with an excellent source of external pollen-borne microorganisms. These microbes provide a variety of benefits including serving as a major dietary requirement for larvae, assisting in biochemical processes such as bee bread fermentation, and assisting in bee resistance to pathogens (Gilliam, 1997). Despite the importance that these organisms play on bee health, there is currently little research on how the microbial composition of bee foraged pollen changes throughout the foraging season in response to abiotic and biotic factors. Rapid advancements in DNA metabarcoding approaches and DNA sequencing technologies have made the assessment of hive level foraging patterns easily accessible. We attempt to leverage the benefits of these new approaches to characterize how microbial composition in pollen provisions changes in relation to shifts in foraging preferences. Here we describe general patterns plant foraging behaviors for two hives across a single foraging season. In addition, we describe the variability of microbial diversity associated with pollen across this same time frame. Our initial description plant and microbial communities present in pollen provisions suggest that pollinator foraging preferences play a significant role in pollen associated microbial communities. This will allow for further research into how the presence of specific beneficial microbes is affected by changes in climate, floral availability, pathogen presence, etc..ReferencesDharampal, P. S., Carlson, C., Currie, C. R., & Steffan, S. A. (2019). Pollen-borne microbes shape bee fitness. Proceedings of the Royal Society B, 286(1904), 20182894.Gilliam, M. (1997). Identification and roles of non-pathogenic microflora associated with honey bees. FEMS Microbiology Letters, 155(1), 1–10. https://doi.org/10.1016/s0378-1097(97)00337-6

A Glance into the Origin of Life through the Lens of the DNA Repair Enzyme MutY from the Lost City Metagenomes

March 21, 2024 12:00 AM
Authors: My Nha Quyen Tran, Cindy Greaves. Mentors: Martin Horvath, Cindy Greaves. Insitution: University of Utah. I have been studying the DNA repair enzyme MutY found at the Lost City thermal field 3000 feet deep in the Atlantic Ocean with conditions similar to those that may have shaped the origin of life. With no sunlight and very little oxygen, life at the Lost City is driven by chemical transformations in rocks at extremely high levels of pH and temperature. DNA in all organisms strictly follows base pairing rules in which A pairs with T and G pairs with C. We all think of oxygen as beneficial, but it can cause damage to DNA. Oxidized guanine (OG) violates the base pairing rules and pairs with A. This causes mutations, which can lead to changes in the genetic information. The mutagenic potential of OG was a challenge that had to be solved early in the emergence of DNA-encoded life. The enzyme MutY functions in suppressing mutations and therefore protects us from developing cancer by finding and removing A from OG:A mispairs. In my effort to replicate conditions at the Lost City so as to explore how the DNA repair enzyme MutY evolved to function in this strange environment I need to purify the enzyme. I used DNA cloning to attach the MutY-encoding genes to a soluble bacterial protein called GST that hopefully will make it easier to purify the MutY proteins. Encouragingly, these fusion proteins expressed well in bacteria and appeared to be soluble. I am now exploring different conditions looking for optimal enzyme activity, which I predict to be different from what familiar bacteria can tolerate. Basic science research on how DNA repair enzymes adapted to the strange environment at the Lost City may inform future translational applications to treat and cure cancer and thus ensure a healthy society in Utah.

Synthesis and testing of hydrophobicly-modified pyridyl-aza crown ethers as chelators of rare earth elements.

March 21, 2024 12:00 AM
Authors: William Lee, Rishab Nayak, Cecilia Knapp, Camila Soderholm. Mentors: Ryan Stolley. Insitution: University of Utah. Recent publications have shown pyridine carboxylate functionalized aza-crown ethers coordinate strongly to a number of rare earth elements. Considering their strong coordination, we have modified these crown-ethers with a number of hydrophobic moieties to allow for adsorption to non-polar substrates to enable packed bed isolation of these elements to address the broad use and limited availability of these elements.